8ZNM | pdb_00008znm

CRYSTAL STRUCTURE OF DI-C-GLYCOSYLTRANSFERASE GGCGT MUTANT IN COMPLEX WITH UDP-GLC


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.21 Å
  • R-Value Free: 
    0.217 (Depositor), 0.218 (DCC) 
  • R-Value Work: 
    0.176 (Depositor), 0.177 (DCC) 
  • R-Value Observed: 
    0.178 (Depositor) 

Starting Model: experimental
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wwPDB Validation   3D Report Full Report


Ligand Structure Quality Assessment 


This is version 1.0 of the entry. See complete history


Literature

CRYSTAL STRUCTURE OF DI-C-GLYCOSYLTRANSFERASE GGCGT MUTANT IN COMPLEX WITH UDP-GLC

Feng, X.D.Liu, X.H.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
GgCGT
A, B, C, D
472Glycyrrhiza glabraMutation(s): 10 
UniProt
Find proteins for A0A6I8WFN2 (Glycyrrhiza glabra)
Explore A0A6I8WFN2 
Go to UniProtKB:  A0A6I8WFN2
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A6I8WFN2
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.21 Å
  • R-Value Free:  0.217 (Depositor), 0.218 (DCC) 
  • R-Value Work:  0.176 (Depositor), 0.177 (DCC) 
  • R-Value Observed: 0.178 (Depositor) 
Space Group: P 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 75.618α = 64.76
b = 81.849β = 88.28
c = 94.141γ = 88.24
Software Package:
Software NamePurpose
PHENIXrefinement
XDSdata reduction
Aimlessdata scaling
PHASERphasing

Structure Validation

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Ligand Structure Quality Assessment 


Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Natural Science Foundation of China (NSFC)China2018YFA0901800

Revision History  (Full details and data files)

  • Version 1.0: 2025-06-04
    Type: Initial release