8ZIU | pdb_00008ziu

Mouse MYH6 R404Q left ventricle actin and myosin complex

PDB DOI: https://doi.org/10.2210/pdb8ZIU/pdb
EM Map EMD-60130: EMDB EMDataResource

Classification: PROTEIN BINDING
Organism(s): Mus musculus
Mutation(s): Yes

Deposited: 2024-05-14 Released: 2025-01-29
Deposition Author(s): Li, D.N., Zhao, Q.Y., Liu, C.
Funding Organization(s): Not funded

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.54 Å
Aggregation State: FILAMENT
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

Validation slider image for 8ZIU

This is version 1.0 of the entry. See complete history.

Literature

Mouse MYH6 R404Q left ventricle actin and myosin complex

Li, D.N., Zhao, Q.Y., Liu, C.

To be published.

Macromolecule Content

Total Structure Weight: 129.32 kDa
Atom Count: 8,668
Modeled Residue Count: 1,085
Deposited Residue Count: 1,142
Unique protein chains: 2

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Actin, alpha cardiac muscle 1	A [auth J]	370	Mus musculus	Mutation(s): 0 EC: 3.6.4
UniProt & NIH Common Fund Data Resources
Find proteins for P68033 (Mus musculus) Explore P68033 Go to UniProtKB: P68033
IMPC: MGI:87905
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P68033
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
Myosin-6	B [auth C]	772	Mus musculus	Mutation(s): 1
UniProt
Find proteins for Q02566 (Mus musculus) Explore Q02566 Go to UniProtKB: Q02566
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q02566
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
ADP (Subject of Investigation/LOI) Query on ADP Download:Ideal Coordinates CCD File SDF format, chain C [auth J] MOL2 format, chain C [auth J] mmCIF format, chain C [auth J]	C [auth J]	ADENOSINE-5'-DIPHOSPHATE C₁₀ H₁₅ N₅ O₁₀ P₂ XTWYTFMLZFPYCI-KQYNXXCUSA-N		Interactions Focus chain C [auth J] Interactions & Density Focus chain C [auth J]

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 3.54 Å
Aggregation State: FILAMENT
Reconstruction Method: SINGLE PARTICLE

EM Software:

Task	Software Package	Version
MODEL REFINEMENT	PHENIX	1.15.2_3472:

Structure Validation

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View more in-depth experimental data

Entry History

& Funding Information

Deposition Data

Released Date: 2025-01-29

Deposition Author(s):

Funding Organization	Location	Grant Number
Not funded		--

Revision History (Full details and data files)

Version 1.0: 2025-01-29
Type: Initial release

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.