8Y3H | pdb_00008y3h

Deposited: 2024-01-29 Released: 2025-01-29
Deposition Author(s): Fibriansah, G., Ng, T.S., Lim, X.N., Tan, A.W.K., Shi, J., Lok, S.M.
Funding Organization(s): Other government

Experimental Data Snapshot

Starting Model: experimental
View more details

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Macromolecule Content

Find similar proteins by:

| 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Envelope protein	A, C, E	495	dengue virus type 2	Mutation(s): 1 Gene Names: E
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
Glycosylation
Glycosylation Sites: 1	Glycosylation Focus chain A Focus chain C Focus chain E
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
Membrane polyprotein	B, D, F	75	dengue virus type 2	Mutation(s): 0
UniProt
Find proteins for A4GVG9 (Dengue virus type 2) Explore A4GVG9 Go to UniProtKB: A4GVG9
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	A4GVG9
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 3
Molecule	Chains	Sequence Length	Organism	Details	Image
Human antibody 2D22 Fab heavy chain	G, I, K	128	Homo sapiens	Mutation(s): 0
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 4
Molecule	Chains	Sequence Length	Organism	Details	Image
Human antibody 2D22 Fab light chain	H, J, L	115	Homo sapiens	Mutation(s): 0
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
Sequence Annotations Expand
Reference Sequence

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
NAG Query on NAG Download:Ideal Coordinates CCD File SDF format, chain M [auth A] SDF format, chain N [auth C] SDF format, chain O [auth E] MOL2 format, chain M [auth A] MOL2 format, chain N [auth C] MOL2 format, chain O [auth E] mmCIF format, chain M [auth A] mmCIF format, chain N [auth C] mmCIF format, chain O [auth E]	M [auth A], N [auth C], O [auth E]	2-acetamido-2-deoxy-beta-D-glucopyranose C₈ H₁₅ N O₆ OVRNDRQMDRJTHS-FMDGEEDCSA-N		Interactions Focus chain M [auth A] Focus chain N [auth C] Focus chain O [auth E] Interactions & Density Focus chain M [auth A] Focus chain N [auth C] Focus chain O [auth E]