8XGW | pdb_00008xgw

Solution structure of d(CGATCG)2-Baicalein complex

• PDB DOI: https://doi.org/10.2210/pdb8XGW/pdb
• NAKB: 8XGW

• Classification: DNA
• Organism(s): synthetic construct
• Mutation(s): No 


• Deposited: 2023-12-15 Released: 2024-02-07 
• Deposition Author(s): Nair, M.S., Kumar, S.
• Funding Organization(s): Not funded

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 500 
• Conformers Submitted: 8 
• Selection Criteria: structures with the lowest energy 

Literature

Solution structure of d(CACGTG)2-Baicalein complex.

Nair, M.S., Kumar, S.

To be published.

Biological Assembly 1  

Biological assembly 1 assigned by authors.

Biological Assembly Evidence: NMR Distance Restraints

Macromolecule Content 

• Total Structure Weight: 3.89 kDa 
• Atom Count: 260 
• Modeled Residue Count: 12 
• Deposited Residue Count: 12 
• Unique nucleic acid chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Length	Organism	Image
DNA (5'-D(*CP*AP*CP*GP*TP*G)-3')	A, B	6	synthetic construct

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
3WL (Subject of Investigation/LOI)	C [auth A]	5,6,7-trihydroxy-2-phenyl-4H-chromen-4-one C15 H10 O5 FXNFHKRTJBSTCS-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 500 
• Conformers Submitted: 8 
• Selection Criteria: structures with the lowest energy 

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2024-02-07 
Deposition Author(s): Nair, M.S., Kumar, S.

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Funding Organization	Location	Grant Number
Not funded		--

Revision History  

• Version 1.0: 2024-02-07
  Type: Initial release
  
• Version 1.1: 2024-05-15
  Changes: Database references
• Version 1.2: 2024-06-26
  Changes: Database references