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 8X9X | pdb_00008x9x

C-hexon capsomer of the VZV C-Capsid

Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.10 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation 3D Report Full Report

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This is version 1.0 of the entry. See complete history. 

Literature

Insights into varicella-zoster virus assembly from the B- and C-capsid at near-atomic resolution structures

Cao, L., Wang, N., Lv, Z., Chen, W., Chen, Z., Song, L., Sha, X., Wang, G., Hu, Y., Lian, X., Cui, G., Fan, J., Quan, Y., Liu, H., Hou, H., Wang, X.

(2024) Hlife 2: 64-74

Macromolecule Content 

  • Total Structure Weight: 1,155 kDa 
  • Atom Count: 78,435 
  • Modeled Residue Count: 10,200 
  • Deposited Residue Count: 10,428 
  • Unique protein chains: 5

Macromolecules

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|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
Major capsid protein
A, C, D, E, F
A, C, D, E, F, H
1,369Human alphaherpesvirus 3Mutation(s): 0 
Gene Names: ORF40, MCP, ORF 40, HHV3_E_SVETAgp42, HHV3_gp42, HHV3gp42
UniProt
Find proteins for P09245 (Varicella-zoster virus (strain Dumas))
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Go to UniProtKB:  P09245
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UniProt GroupP09245
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Reference Sequence
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Entity ID: 2
MoleculeChains  Sequence LengthOrganismDetailsImage
Small capsomere-interacting protein94Human alphaherpesvirus 3Mutation(s): 0 
Gene Names: SCP
UniProt
Find proteins for P09279 (Varicella-zoster virus (strain Dumas))
Explore P09279 
Go to UniProtKB:  P09279
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UniProt GroupP09279
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Reference Sequence
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|  3D Structure
Entity ID: 3
MoleculeChains  Sequence LengthOrganismDetailsImage
Tri2AM [auth I],
N [auth K]		256Human alphaherpesvirus 3Mutation(s): 0 
UniProt
Find proteins for P09291 (Varicella-zoster virus (strain Dumas))
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Go to UniProtKB:  P09291
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UniProt GroupP09291
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Reference Sequence
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|  3D Structure
Entity ID: 4
MoleculeChains  Sequence LengthOrganismDetailsImage
Tri2BO [auth N],
P		263Human alphaherpesvirus 3Mutation(s): 0 
UniProt
Find proteins for P09291 (Varicella-zoster virus (strain Dumas))
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Go to UniProtKB:  P09291
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UniProt GroupP09291
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Reference Sequence
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|  3D Structure
Entity ID: 5
MoleculeChains  Sequence LengthOrganismDetailsImage
Tri1Q [auth S],
R [auth U]		306Human alphaherpesvirus 3Mutation(s): 0 
UniProt
Find proteins for P09276 (Varicella-zoster virus (strain Dumas))
Explore P09276 
Go to UniProtKB:  P09276
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UniProt GroupP09276
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.10 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

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Entry History 

& Funding Information

Deposition Data

Funding OrganizationLocationGrant Number
Not funded--

Revision History  (Full details and data files)

  • Version 1.0: 2025-04-30
    Type: Initial release