Structure-function relationship of KaiC around dawn
Furuike, Y., Yamashita, E., Akiyama, S.(2023) Biophys Physicobiol 20
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
(2023) Biophys Physicobiol 20
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Circadian clock oscillator protein KaiC | 519 | Synechococcus elongatus PCC 7942 = FACHB-805 | Mutation(s): 2  Gene Names: kaiC | ||
UniProt | |||||
Find proteins for Q79PF4 (Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)) Explore Q79PF4  Go to UniProtKB:  Q79PF4 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q79PF4 | ||||
Sequence AnnotationsExpand | |||||
|
Ligands 2 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
ATP Query on ATP | C [auth A], D [auth A], G [auth B], H [auth B] | ADENOSINE-5'-TRIPHOSPHATE C10 H16 N5 O13 P3 ZKHQWZAMYRWXGA-KQYNXXCUSA-N | |||
MG (Subject of Investigation/LOI) Query on MG | E [auth A], F [auth A], I [auth B], J [auth B] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 95.191 | α = 90 |
b = 95.191 | β = 90 |
c = 184.086 | γ = 120 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
PDB_EXTRACT | data extraction |
XDS | data reduction |
XDS | data scaling |
MOLREP | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
Not funded | -- |