8WDD

Crystal structure of BSA in complex with B1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.90 Å
  • R-Value Free: 0.370 
  • R-Value Work: 0.309 
  • R-Value Observed: 0.312 

Starting Model: experimental
View more details

wwPDB Validation   3D Report Full Report


Ligand Structure Quality Assessment 


This is version 1.1 of the entry. See complete history


Literature

Crystal structure of BSA in complex with B1

Chen, X.Ge, Y.H.Yang, H.Fang, B.Li, L.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Albumin
A, B
583Bos taurusMutation(s): 0 
Gene Names: ALB
UniProt
Find proteins for P02769 (Bos taurus)
Explore P02769 
Go to UniProtKB:  P02769
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP02769
Sequence Annotations
Expand
  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
VZK (Subject of Investigation/LOI)
Query on VZK

Download Ideal Coordinates CCD File 
C [auth A]
D [auth A]
E [auth A]
F [auth B]
G [auth B]
C [auth A],
D [auth A],
E [auth A],
F [auth B],
G [auth B],
H [auth B],
I [auth B],
J [auth B],
K [auth B]
~{N},~{N}-dimethyl-6-[(~{E})-2-(1-methylpyridin-1-ium-4-yl)ethenyl]naphthalen-2-amine
C20 H21 N2
LJEHGRUCASFWGC-UHFFFAOYSA-N
Experimental Data & Validation

Experimental Data

Unit Cell:
Length ( Å )Angle ( ˚ )
a = 145.822α = 90
b = 45.133β = 104.5
c = 209.207γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
XDSdata reduction
Aimlessdata scaling
PHASERphasing

Structure Validation

View Full Validation Report



Ligand Structure Quality Assessment 


Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Natural Science Foundation of China (NSFC)China21807088

Revision History  (Full details and data files)

  • Version 1.0: 2024-09-18
    Type: Initial release
  • Version 1.1: 2024-10-23
    Changes: Structure summary