8W6F

Apo structure of HBC binder

• PDB DOI: https://doi.org/10.2210/pdb8W6F/pdb

• Classification: DE NOVO PROTEIN
• Organism(s): artificial sequences
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2023-08-28 Released: 2024-11-27 
• Deposition Author(s): Liang, M.F., Zhu, J.Y., Lu, P.L.
• Funding Organization(s): Ministry of Science and Technology (MoST, China)

---

Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.35 Å
• R-Value Free: 0.276 
• R-Value Work: 0.247 
• R-Value Observed: 0.249 

Starting Model: in silico

Literature

Apo structure of HBC binder

Liang, M.F., Zhu, J.Y., Lu, P.L.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Biological Assembly Evidence: gel filtration

Biological Assembly 2  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 2 assigned by authors.

Macromolecule Content

• Total Structure Weight: 42.92 kDa 
• Atom Count: 2,725 
• Modelled Residue Count: 320 
• Deposited Residue Count: 340 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
wFAP1.1 structure	A, B	170	artificial sequences	Mutation(s): 0

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.35 Å
• R-Value Free: 0.276 
• R-Value Work: 0.247 
• R-Value Observed: 0.249 
• Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 40.107	α = 90
b = 92.402	β = 108.062
c = 51.813	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
HKL-2000	data reduction
HKL-2000	data scaling
PHASER	phasing

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2024-11-27 
Deposition Author(s): Liang, M.F., Zhu, J.Y., Lu, P.L.

---

Funding Organization	Location	Grant Number
Ministry of Science and Technology (MoST, China)	China	2020YFA0909200

Revision History  

• Version 1.0: 2024-11-27
  Type: Initial release