8W3V

Crystal structure of human WDR41

• PDB DOI: https://doi.org/10.2210/pdb8W3V/pdb
• Entry: 8W3V supersedes: 6WHH

• Classification: PROTEIN BINDING
• Organism(s): Homo sapiens
• Expression System: Spodoptera frugiperda
• Mutation(s): No 


• Deposited: 2024-02-22 Released: 2024-03-27 
• Deposition Author(s): Hutchinson, A., Dong, A., Li, Y., Seitova, A., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Halabelian, L., Structural Genomics Consortium (SGC)
• Funding Organization(s): Other private

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.20 Å
• R-Value Free: 0.253 
• R-Value Work: 0.214 
• R-Value Observed: 0.216 

Literature

Crystal structure of human WDR41

Hutchinson, A., Dong, A., Li, Y., Seitova, A., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Halabelian, L., Structural Genomics Consortium (SGC)

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors and generated by PISA (software)

Biological Assembly 2  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 2 assigned by authors and generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 84.16 kDa 
• Atom Count: 4,960 
• Modelled Residue Count: 665 
• Deposited Residue Count: 746 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
WD repeat-containing protein 41	A, B	373	Homo sapiens	Mutation(s): 0  Gene Names: WDR41, MSTP048
UniProt & NIH Common Fund Data Resources
Find proteins for Q9HAD4 (Homo sapiens) Explore Q9HAD4  Go to UniProtKB:  Q9HAD4
PHAROS:  Q9HAD4 GTEx:  ENSG00000164253

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.20 Å
• R-Value Free: 0.253 
• R-Value Work: 0.214 
• R-Value Observed: 0.216 
• Space Group: C 1 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 229.124	α = 90
b = 86.006	β = 94.06
c = 52.62	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
HKL-3000	data scaling
PHASER	phasing
HKL-3000	data reduction

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2024-03-27 
Deposition Author(s): Hutchinson, A., Dong, A., Li, Y., Seitova, A., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Halabelian, L., Structural Genomics Consortium (SGC)
• This entry supersedes: 6WHH

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Funding Organization	Location	Grant Number
Other private	Canada	--

Revision History  

• Version 1.0: 2024-03-27
  Type: Initial release