8USO

Full-length human CaMKII delta holoenzyme

• PDB DOI: https://doi.org/10.2210/pdb8USO/pdb

• Classification: TRANSFERASE
• Organism(s): Homo sapiens
• Expression System: Escherichia coli
• Mutation(s): Yes 


• Deposited: 2023-10-28 Released: 2024-03-27 
• Deposition Author(s): Ozden, C., Abromson, N.L., Tomchick, D.R., Stratton, M.M., Garman, S.C.
• Funding Organization(s): National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.30 Å
• R-Value Free: 0.213 
• R-Value Work: 0.184 
• R-Value Observed: 0.185 

Literature

Full-length human CaMKII delta holoenzyme

Ozden, C., Abromson, N.L., Stratton, M.M., Garman, S.C.

To be published.

Biological Assembly 1  

Global Symmetry: Dihedral - D6  (Explore in 3D)
Global Stoichiometry: Homo 12-mer - A12 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 153.83 kDa 
• Atom Count: 10,781 
• Modelled Residue Count: 1,307 
• Deposited Residue Count: 1,350 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
calcium/calmodulin-dependent protein kinase	A, B, C	450	Homo sapiens	Mutation(s): 1  Gene Names: CAMK2D
UniProt & NIH Common Fund Data Resources
Find proteins for D6R938 (Homo sapiens) Explore D6R938  Go to UniProtKB:  D6R938
GTEx:  ENSG00000145349

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
MLI	D [auth A], E [auth B], F [auth C]	MALONATE ION C3 H2 O4 OFOBLEOULBTSOW-UHFFFAOYSA-L

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.30 Å
• R-Value Free: 0.213 
• R-Value Work: 0.184 
• R-Value Observed: 0.185 
• Space Group: P 4₂ 2 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 174.984	α = 90
b = 174.984	β = 90
c = 140.416	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
HKL-3000	data scaling
HKL-3000	data reduction
PHASER	phasing

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2024-03-27 
Deposition Author(s): Ozden, C., Abromson, N.L., Tomchick, D.R., Stratton, M.M., Garman, S.C.

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Funding Organization	Location	Grant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)	United States	183180

Revision History  

• Version 1.0: 2024-03-27
  Type: Initial release