Crystal Structure of Cystathionine beta lyase from Klebsiella aerogenes (PLP-Serine adduct)
Liu, L., Lovell, S., Battaile, K.P., Cooper, A.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Cystathionine beta-lyase | 403 | Klebsiella aerogenes KCTC 2190 | Mutation(s): 2  Gene Names: EAE_03480 EC: 4.4.1.8 (PDB Primary Data), 4.4.1.13 (UniProt) | ||
UniProt | |||||
Find proteins for A0A0H3FMF8 (Klebsiella aerogenes (strain ATCC 13048 / DSM 30053 / CCUG 1429 / JCM 1235 / KCTC 2190 / NBRC 13534 / NCIMB 10102 / NCTC 10006 / CDC 819-56)) Explore A0A0H3FMF8  Go to UniProtKB:  A0A0H3FMF8 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A0H3FMF8 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 4 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
PLP (Subject of Investigation/LOI) Query on PLP | C [auth A], G [auth B] | PYRIDOXAL-5'-PHOSPHATE C8 H10 N O6 P NGVDGCNFYWLIFO-UHFFFAOYSA-N | |||
MPD Query on MPD | E [auth A], I [auth B] | (4S)-2-METHYL-2,4-PENTANEDIOL C6 H14 O2 SVTBMSDMJJWYQN-YFKPBYRVSA-N | |||
SER (Subject of Investigation/LOI) Query on SER | D [auth A], H [auth B] | SERINE C3 H7 N O3 MTCFGRXMJLQNBG-REOHCLBHSA-N | |||
CL Query on CL | F [auth A], J [auth B], K [auth B] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |
Length ( Å ) | Angle ( ˚ ) |
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a = 87.814 | α = 90 |
b = 131.172 | β = 103.93 |
c = 82.672 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
Aimless | data scaling |
XDS | data reduction |
PHASER | phasing |
Funding Organization | Location | Grant Number |
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National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID) | United States | 75N93022C00036 |
National Institutes of Health/Office of the Director | United States | S10OD030394 |