8TZM | pdb_00008tzm

Solution structure for a putative Type I site-specific deoxyribonuclease from Neisseria gonorrhoeae (NCCP11945). Seattle Structural Genomics Center for Infectious Disease target NegoA.19201.a

PDB DOI: https://doi.org/10.2210/pdb8TZM/pdb
BMRB: 31103

Classification: STRUCTURAL GENOMICS
Organism(s): Neisseria gonorrhoeae NCCP11945
Expression System: Escherichia coli BL21
Mutation(s): No

Deposited: 2023-08-27 Released: 2023-10-04
Deposition Author(s): Buchko, G.W., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Funding Organization(s): National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: target function

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Structural characterization of a putative Type I site-specific deoxyribonuclease from Neisseria gonorrhoeae (NCCP11945).

Buchko, G.W., van Voorhis, W.C., Myler, P.J.

To be published.

Macromolecule Content

Total Structure Weight: 14.15 kDa
Atom Count: 997
Modeled Residue Count: 115
Deposited Residue Count: 115
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Type I site-specific deoxyribonuclease	A	115	Neisseria gonorrhoeae NCCP11945	Mutation(s): 0 Gene Names: NGK_0701
UniProt
Find proteins for B4RKP1 (Neisseria gonorrhoeae (strain NCCP11945)) Explore B4RKP1 Go to UniProtKB: B4RKP1
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	B4RKP1
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: target function

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2023-10-04

Deposition Author(s):

Seattle Structural Genomics Center for Infectious Disease (SSGCID)

Funding Organization	Location	Grant Number
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)	United States	HHSN272201700059C

Revision History (Full details and data files)

Version 1.0: 2023-10-04
Type: Initial release
Version 1.1: 2024-05-15
Changes: Database references

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.