8TWK | pdb_00008twk

Cryo-EM structure of Aldolase collected by EPU on Glacios at 2.6 Angstrom resolution

PDB DOI: https://doi.org/10.2210/pdb8TWK/pdb
EM Map EMD-41669: EMDB EMDataResource

Classification: LYASE
Organism(s): Oryctolagus cuniculus
Mutation(s): No

Deposited: 2023-08-21 Released: 2024-09-04
Deposition Author(s): Jia, L., Ruben, E.A., Olsen, S.K., Wasmuth, E.V.
Funding Organization(s): National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.60 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

Validation slider image for 8TWK

This is version 1.1 of the entry. See complete history.

Literature

Cryo-EM structure of Aldolase collected by EPU on Glacios at 2.6 Angstrom resolution

Jia, L., Ruben, E.A., Olsen, S.K., Wasmuth, E.V.

To be published.

Macromolecule Content

Total Structure Weight: 149.6 kDa
Atom Count: 10,800
Modeled Residue Count: 1,372
Deposited Residue Count: 1,376
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Fructose-bisphosphate aldolase A	A, B, C, D	344	Oryctolagus cuniculus	Mutation(s): 0 EC: 4.1.2.13
UniProt
Find proteins for P00883 (Oryctolagus cuniculus) Explore P00883 Go to UniProtKB: P00883
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P00883
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 2.60 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

EM Software:

Task	Software Package	Version
MODEL REFINEMENT	PHENIX

Structure Validation

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Entry History

& Funding Information

Deposition Data

Released Date: 2024-09-04

Deposition Author(s):

Funding Organization	Location	Grant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)	United States	--

Revision History (Full details and data files)

Version 1.0: 2024-09-04
Type: Initial release
Version 1.1: 2025-06-04
Changes: Data collection, Structure summary

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.