Download MendeleyCrystal structure of aminopeptidase N from Mycobacterium tuberculosis
Park, H.W., Moss, D.L., Landry, S.J.To be published.
8T41
Crystal structure of aminopeptidase N from Mycobacterium tuberculosis
- PDB DOI: https://doi.org/10.2210/pdb8T41/pdb
- Classification: HYDROLASE
- Organism(s): Mycobacterium tuberculosis
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2023-06-08 Released: 2024-04-17
- Funding Organization(s): Not funded
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.45 Å
- R-Value Free: 0.166
- R-Value Work: 0.143
- R-Value Observed: 0.144
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Aminopeptidase N | 867 | Mycobacterium tuberculosis | Mutation(s): 0 Gene Names: pepN |  | |
UniProt | |||||
Find proteins for Q7D736 (Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)) Explore Q7D736 Go to UniProtKB: Q7D736 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q7D736 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| ZN (Subject of Investigation/LOI) Query on ZN | B [auth A] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |  | ||
| MG (Subject of Investigation/LOI) Query on MG | C [auth A], D [auth A] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.45 Å
- R-Value Free: 0.166
- R-Value Work: 0.143
- R-Value Observed: 0.144
- Space Group: C 1 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 283.588 | α = 90 |
| b = 56.747 | β = 97.88 |
| c = 58.138 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| XDS | data reduction |
| Aimless | data scaling |
| MOLREP | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2024-04-17 Deposition Author(s): Park, H.W., Moss, D.L., Landry, S.J.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Not funded | -- |
Revision History (Full details and data files)
- Version 1.0: 2024-04-17
Type: Initial release - Version 1.1: 2024-04-24
Changes: Structure summary
