8SX0 | pdb_00008sx0

Bordetella filamentous hemagglutinin (FhaB) C-terminal domain

• PDB DOI: https://doi.org/10.2210/pdb8SX0/pdb

• Classification: TOXIN
• Organism(s): Bordetella pertussis
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2023-05-19 Released: 2024-05-29 
• Deposition Author(s): Cuthbert, B.J., Goulding, C.W., Hayes, C.S., Costello, M.S.
• Funding Organization(s): National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.65 Å
• R-Value Free: 
  0.204 (Depositor), 0.200 (DCC) 
• R-Value Work: 
  0.179 (Depositor), 0.180 (DCC) 
• R-Value Observed: 
  0.181 (Depositor) 

Literature

Bordetella filamentous hemagglutinin (FhaB) C-terminal domain

Cuthbert, B.J., Goulding, C.W., Hayes, C.S., Costello, M.S.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors and generated by PISA (software)

Biological Assembly 2  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 2 assigned by authors and generated by PISA (software)

Macromolecule Content 

• Total Structure Weight: 26 kDa 
• Atom Count: 1,735 
• Modeled Residue Count: 194 
• Deposited Residue Count: 224 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Filamentous hemagglutinin	A, B	111	Bordetella pertussis	Mutation(s): 0  Gene Names: fhaB_1, NCTC10911_02131
UniProt
Find proteins for P12255 (Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)) Explore P12255  Go to UniProtKB:  P12255

Small Molecules

Ligands 3 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
PO4	C [auth A], D [auth A], F [auth B]	PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K
GOL	G [auth B]	GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N
CA	E [auth A], H [auth B]	CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N

Modified Residues  1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
MSE	A, B	L-PEPTIDE LINKING	C5 H11 N O2 Se		MET

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.65 Å
• R-Value Free:  0.204 (Depositor), 0.200 (DCC) 
• R-Value Work:  0.179 (Depositor), 0.180 (DCC) 
• R-Value Observed: 0.181 (Depositor) 

Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 23.06	α = 90
b = 46.576	β = 91.69
c = 75.987	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
XDS	data reduction
Aimless	data scaling
AutoSol	phasing

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2024-05-29 
Deposition Author(s): Cuthbert, B.J., Goulding, C.W., Hayes, C.S., Costello, M.S.

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Funding Organization	Location	Grant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)	United States	--

Revision History  

• Version 1.0: 2024-05-29
  Type: Initial release
  
• Version 1.1: 2024-11-20
  Changes: Structure summary