8SRQ

Structure of human ULK1C:PI3KC3-C1 supercomplex

  • Classification: IMMUNE SYSTEM
  • Organism(s): Homo sapiens
  • Expression System: Homo sapiens
  • Mutation(s): No 

  • Deposited: 2023-05-05 Released: 2023-06-21 
  • Deposition Author(s): Chen, M., Hurley, J.H.
  • Funding Organization(s): National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS), Michael J. Fox Foundation

Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 6.20 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history. 


Literature

Structure and activation of the human autophagy-initiating ULK1C:PI3KC3-C1 supercomplex

Chen, M., Ren, X., Cook, A., Hurley, J.H.

(2023) Biorxiv 


Macromolecules
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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
RB1-inducible coiled-coil protein 1
A, B
600Homo sapiensMutation(s): 0 
Gene Names: RB1CC1, KIAA0203, RBICC
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Find proteins for Q8TDY2 (Homo sapiens)
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PHAROS:  Q8TDY2
GTEx:  ENSG00000023287 
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UniProt GroupQ8TDY2
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Serine/threonine-protein kinase ULK1205Homo sapiensMutation(s): 0 
Gene Names: ULK1, KIAA0722
EC: 2.7.11.1
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Find proteins for O75385 (Homo sapiens)
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PHAROS:  O75385
GTEx:  ENSG00000177169 
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UniProt GroupO75385
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
Autophagy-related protein 1361Homo sapiensMutation(s): 0 
Gene Names: ATG13, KIAA0652
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Find proteins for O75143 (Homo sapiens)
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PHAROS:  O75143
GTEx:  ENSG00000175224 
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Entity ID: 4
MoleculeChains Sequence LengthOrganismDetailsImage
Phosphoinositide 3-kinase regulatory subunit 4E [auth W]1,344Homo sapiensMutation(s): 0 
Gene Names: PIK3R4, VPS15
EC: 2.7.11.1
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Find proteins for Q99570 (Homo sapiens)
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PHAROS:  Q99570
GTEx:  ENSG00000196455 
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Entity ID: 5
MoleculeChains Sequence LengthOrganismDetailsImage
Phosphatidylinositol 3-kinase catalytic subunit type 3F [auth X]274Homo sapiensMutation(s): 0 
Gene Names: PIK3C3, VPS34
EC: 2.7.1.137
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Find proteins for Q8NEB9 (Homo sapiens)
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PHAROS:  Q8NEB9
GTEx:  ENSG00000078142 
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Entity ID: 6
MoleculeChains Sequence LengthOrganismDetailsImage
Beclin 1-associated autophagy-related key regulatorG [auth Y]319Homo sapiensMutation(s): 0 
Gene Names: ATG14, ATG14L, KIAA0831
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Find proteins for Q6ZNE5 (Homo sapiens)
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PHAROS:  Q6ZNE5
GTEx:  ENSG00000126775 
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UniProt GroupQ6ZNE5
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Entity ID: 7
MoleculeChains Sequence LengthOrganismDetailsImage
Beclin-1-C 35 kDaH [auth Z]301Homo sapiensMutation(s): 0 
Gene Names: BECN1, GT197
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Find proteins for Q14457 (Homo sapiens)
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PHAROS:  Q14457
GTEx:  ENSG00000126581 
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Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 6.20 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
RECONSTRUCTIONcryoSPARC4.1.1
MODEL REFINEMENTPHENIX1.20.1

Structure Validation

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View more in-depth experimental data
Entry History & Funding Information

Deposition Data

Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesGM111730
Michael J. Fox FoundationUnited StatesASAP-000350

Revision History  (Full details and data files)

  • Version 1.0: 2023-06-21
    Type: Initial release