8SDI | pdb_00008sdi

Hydrophobic Interactions Drive the Tetrameric Assembly of the TRIM45 Coiled-Coil Domain

PDB DOI: https://doi.org/10.2210/pdb8SDI/pdb

Classification: LIGASE
Organism(s): Mus musculus
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2023-04-06 Released: 2024-04-24
Deposition Author(s): Lou, X.H., Ma, B.B., Zhuang, Y., Li, X.C.
Funding Organization(s): National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.70 Å
R-Value Free:
0.271 (Depositor), 0.271 (DCC)
R-Value Work:
0.239 (Depositor), 0.239 (DCC)

Starting Model: experimental
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This is version 1.0 of the entry. See complete history.

Literature

Hydrophobic Interactions Drive the Tetrameric Assembly of the TRIM45 Coiled-Coil Domain

Lou, X.H., Ma, B.B., Zhuang, Y., Li, X.C.

To be published.

Macromolecule Content

Total Structure Weight: 37.87 kDa
Atom Count: 2,546
Modeled Residue Count: 320
Deposited Residue Count: 340
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Tripartite motif-containing protein 45	A, B, C, D	85	Mus musculus	Mutation(s): 0 Gene Names: Trim45 EC: 2.3.2.27
UniProt & NIH Common Fund Data Resources
Find proteins for Q6PFY8 (Mus musculus) Explore Q6PFY8 Go to UniProtKB: Q6PFY8
IMPC: MGI:1918187
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q6PFY8
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.70 Å
R-Value Free: 0.271 (Depositor), 0.271 (DCC)
R-Value Work: 0.239 (Depositor), 0.239 (DCC)

Space Group: I 4₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 55.85	α = 90
b = 55.85	β = 90
c = 347.219	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
MOSFLM	data reduction
Aimless	data scaling
PHENIX	phasing

Structure Validation

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Entry History

& Funding Information

Deposition Data

Released Date: 2024-04-24

Deposition Author(s):

Funding Organization	Location	Grant Number
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)	United States	R01 AI080779
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)	United States	R01 AI155488

Revision History (Full details and data files)

Version 1.0: 2024-04-24
Type: Initial release

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.