8RRH | pdb_00008rrh

The human prohibitin complex


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 16.3 Å
  • Aggregation State: CELL 
  • Reconstruction Method: SUBTOMOGRAM AVERAGING 

Starting Model: in silico
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wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

In situ architecture of the human prohibitin complex.

Lange, F.Ratz, M.Dohrke, J.N.Le Vasseur, M.Wenzel, D.Ilgen, P.Riedel, D.Jakobs, S.

(2025) Nat Cell Biol 27: 633-640

  • DOI: https://doi.org/10.1038/s41556-025-01620-1
  • Primary Citation of Related Structures:  
    8RRH

  • PubMed Abstract: 

    Prohibitins are a highly conserved family of proteins that have been implicated in a variety of functions including mitochondrial stress signalling and housekeeping, cell cycle progression, apoptosis, lifespan regulation and many others. The human prohibitins prohibitin 1 and prohibitin 2 have been proposed to act as scaffolds within the mitochondrial inner membrane, but their molecular organization has remained elusive. Here we determined the molecular organization of the human prohibitin complex within the mitochondrial inner membrane using an integrative structural biology approach combining quantitative western blotting, cryo-electron tomography, subtomogram averaging and molecular modelling. The proposed bell-shaped structure consists of 11 alternating prohibitin 1 and prohibitin 2 molecules. This study reveals an average of about 43 prohibitin complexes per crista, covering 1-3% of the crista membrane area. These findings provide a structural basis for understanding the functional contributions of prohibitins to the integrity and spatial organization of the mitochondrial inner membrane.


  • Organizational Affiliation
    • Department of NanoBiophotonics, Max Planck Institute for Multidisciplinary Sciences, Göttingen, Germany.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Prohibitin 1
A, C, E, G, I
A, C, E, G, I, K
272Homo sapiensMutation(s): 0 
Membrane Entity: Yes 
UniProt & NIH Common Fund Data Resources
Find proteins for P35232 (Homo sapiens)
Explore P35232 
Go to UniProtKB:  P35232
PHAROS:  P35232
GTEx:  ENSG00000167085 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP35232
Sequence Annotations
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  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Prohibitin-2
B, D, F, H, J
299Homo sapiensMutation(s): 0 
Membrane Entity: Yes 
UniProt & NIH Common Fund Data Resources
Find proteins for Q99623 (Homo sapiens)
Explore Q99623 
Go to UniProtKB:  Q99623
PHAROS:  Q99623
GTEx:  ENSG00000215021 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ99623
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 16.3 Å
  • Aggregation State: CELL 
  • Reconstruction Method: SUBTOMOGRAM AVERAGING 
EM Software:
TaskSoftware PackageVersion
RECONSTRUCTIONRELION4.0

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
German Research Foundation (DFG)Germany2067/1- 390729940
European Research Council (ERC)European UnionERCAdG No. 835102
German Research Foundation (DFG)GermanyTRR 274
German Research Foundation (DFG)GermanySFB 1456
German Research Foundation (DFG)GermanyFOR 2848

Revision History  (Full details and data files)

  • Version 1.0: 2024-12-18
    Type: Initial release
  • Version 1.1: 2025-04-02
    Changes: Data collection, Database references
  • Version 1.2: 2025-04-23
    Changes: Data collection, Database references