Chromosome end protection by RAP1-mediated inhibition of DNA-PK.
Eickhoff, P., Sonmez, C., Fisher, C.E.L., Inian, O., Roumeliotis, T.I., Dello Stritto, A., Mansfeld, J., Choudhary, J.S., Guettler, S., Lottersberger, F., Douglas, M.E.(2025) Nature 642: 1090-1096
- PubMed: 40240611 
- DOI: https://doi.org/10.1038/s41586-025-08896-1
- Primary Citation of Related Structures:  
8RD4 - PubMed Abstract: 
During classical non-homologous end joining (cNHEJ), DNA-dependent protein kinase (DNA-PK) encapsulates free DNA ends, forming a recruitment platform for downstream end-joining factors including ligase 4 (LIG4) 1 . DNA-PK can also bind telomeres and regulate their resection 2-4 , but does not initiate cNHEJ at this position. How the end-joining process is regulated in this context-specific manner is currently unclear. Here we show that the shelterin components TRF2 and RAP1 form a complex with DNA-PK that directly represses its end-joining function at telomeres. Biochemical experiments and cryo-electron microscopy reveal that when bound to TRF2, RAP1 establishes a network of interactions with KU and DNA that prevents DNA-PK from recruiting LIG4. In mouse and human cells, RAP1 is redundant with the Apollo nuclease in repressing cNHEJ at chromosome ends, demonstrating that the inhibition of DNA-PK prevents telomere fusions in parallel with overhang-dependent mechanisms. Our experiments show that the end-joining function of DNA-PK is directly and specifically repressed at telomeres, establishing a molecular mechanism for how individual linear chromosomes are maintained in mammalian cells.
- Telomere Biology Laboratory, The Institute of Cancer Research, London, UK.
Organizational Affiliation: 





















