8R2O | pdb_00008r2o

Huntingtin-Q17, 1-66, N-MBP fusion


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.23 Å
  • R-Value Free: 
    0.238 (Depositor), 0.247 (DCC) 
  • R-Value Work: 
    0.166 (Depositor), 0.177 (DCC) 
  • R-Value Observed: 
    0.168 (Depositor) 

Starting Model: experimental
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wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Post-translational modifications of huntingtin's N17 region: implications for self-association and membrane binding.

Gallo, M.Ingenito, R.Finotto, M.Di Marino, S.Cicero, D.Bianchi, E.Neudegger, T.Blaesse, M.Steinbacher, S.Warfield, B.M.Frush, E.H.Toledo-Sherman, L.Dominguez, C.Monteagudo, E.Lee, M.R.Doherty, E.M.

(2025) Biochim Biophys Acta Mol Basis Dis 1871: 168019-168019

  • DOI: https://doi.org/10.1016/j.bbadis.2025.168019
  • Primary Citation of Related Structures:  
    8R2O

  • PubMed Abstract: 

    Huntington's disease is a neurodegenerative disorder associated with a polyglutamine expansion within the first exon of the huntingtin protein (HTT exon 1). This mutation results in HTT dysfunction and the production of N-terminal HTT aggregates. The dimerization of the HTT exon 1 fragment through self-association of the first 17 residues (N17) is considered the initial step in the HTT exon 1 aggregation pathway. The association of N17 with membranes has been proposed to catalyze aggregation by increasing the local concentration of exon 1, and post-translational modifications (PTMs) in N17 are known to influence membrane interaction and the aggregation rate of exon 1. To elucidate the influence of N17 PTMs on both self-association and membrane interaction, thereby gaining insight into HTT function and exon 1 aggregation, we used solution nuclear magnetic resonance and circular dichroism spectroscopies to address loss of initial methionine, subsequent acetylation, and phosphorylation of threonine and serines. Our findings indicate that modifications to N17 that enhance helicity correspond to increased self-association and membrane interaction. We then conducted X-ray crystallographic studies that led to a proposed HTT exon 1 dimerization model consistent with the association of N17 dimers. This provides insight into the impact of PTMs on HTT aggregation. The experimental methods and N17 self-association model we describe may serve as a foundation for further experiments exploring the influence of N17 PTMs on HTT function and pathogenicity.


  • Organizational Affiliation
    • IRBM S.p.A., Pomezia, Italy. Electronic address: mariana.gallo@unipr.it.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Maltodextrin-binding protein,Huntingtin, myristoylated N-terminal fragment
A, B
442Homo sapiensMutation(s): 0 
Gene Names: malEJW3994HTTHDIT15
UniProt & NIH Common Fund Data Resources
Find proteins for P42858 (Homo sapiens)
Explore P42858 
Go to UniProtKB:  P42858
PHAROS:  P42858
GTEx:  ENSG00000197386 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP42858
Sequence Annotations
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  • Reference Sequence
Oligosaccharides

Help

Entity ID: 2
MoleculeChains Length2D Diagram Glycosylation3D Interactions
alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
C, D
2N/A
Glycosylation Resources
GlyTouCan:  G07411ON
GlyCosmos:  G07411ON
Biologically Interesting Molecules (External Reference) 1 Unique
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.23 Å
  • R-Value Free:  0.238 (Depositor), 0.247 (DCC) 
  • R-Value Work:  0.166 (Depositor), 0.177 (DCC) 
  • R-Value Observed: 0.168 (Depositor) 
Space Group: F 2 3
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 278.619α = 90
b = 278.619β = 90
c = 278.619γ = 90
Software Package:
Software NamePurpose
XDSdata reduction
XSCALEdata scaling
REFMACrefinement
XDSdata scaling
PHASERphasing

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
CHDI FoundationUnited States--

Revision History  (Full details and data files)

  • Version 1.0: 2024-09-18
    Type: Initial release
  • Version 1.1: 2025-09-03
    Changes: Database references, Structure summary
  • Version 1.2: 2025-09-10
    Changes: Database references