8QRH

Inactivated tick-borne encephalitis virus (TBEV) vaccine strain Sofjin-Chumakov


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.60 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Inactivated Tick-borne Encephalitis Virus (Sofjin-Chumakov strain)

Moiseenko, A.Zhang, Y.Vorovitch, M.Khvatov, E.Ivanova, A.Liu, Z.Osolodkin, D.Ishmukhametov, A.Sokolova, O.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Genome polyprotein
A, B, C
492Orthoflavivirus encephalitidisMutation(s): 0 
UniProt
Find proteins for D2XD30 (Tick-borne encephalitis virus)
Explore D2XD30 
Go to UniProtKB:  D2XD30
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupD2XD30
Sequence Annotations
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  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Small envelope protein M
D, E, F
71Orthoflavivirus encephalitidisMutation(s): 0 
UniProt
Find proteins for Q01299 (Tick-borne encephalitis virus (strain Hypr))
Explore Q01299 
Go to UniProtKB:  Q01299
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ01299
Sequence Annotations
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.60 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
MODEL REFINEMENTCoot
MODEL REFINEMENTISOLDE
MODEL REFINEMENTPHENIX

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Other government23A-Sh04-01
Ministry of Education and Science of the Russian FederationRussian FederationFNZG-2022-0002

Revision History  (Full details and data files)

  • Version 1.0: 2024-06-05
    Type: Initial release