8PHH | pdb_00008phh

Cryo-EM structure of Atkinsonella Hypoxylon Virus-like particles.

• PDB DOI: https://doi.org/10.2210/pdb8PHH/pdb
• EM Map EMD-17662: EMDB EMDataResource

• Classification: VIRUS LIKE PARTICLE
• Organism(s): Atkinsonella hypoxylon
• Expression System: Nicotiana benthamiana
• Mutation(s): No 


• Deposited: 2023-06-19 Released: 2025-05-28 
• Deposition Author(s): Byrne, M.J., Sainsbury, F.
• Funding Organization(s): Australian Research Council (ARC)

---

Experimental Data Snapshot

• Method: ELECTRON MICROSCOPY
• Resolution: 2.50 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Literature

Cryo-EM structure of Atkinsonella Hypoxylon Virus-like particles.

Byrne, M.J., Sainsbury, F.

To be published.

Biological Assembly 1  

Global Symmetry: Icosahedral - I  (Explore in 3D)
Global Stoichiometry: Homo 120-mer - A120 

Biological assembly 1 assigned by authors and generated by (software)

Biological Assembly Evidence: electron microscopy

Macromolecule Content 

• Total Structure Weight: 147.49 kDa 
• Atom Count: 9,142 
• Modeled Residue Count: 1,128 
• Deposited Residue Count: 1,304 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Capsid protein	A [auth B], B [auth A]	652	Atkinsonella hypoxylon	Mutation(s): 0
UniProt
Find proteins for Q85056 (Atkinsonella hypoxylon virus (isolate 2H)) Explore Q85056  Go to UniProtKB:  Q85056

Experimental Data & Validation

Experimental Data

• Method: ELECTRON MICROSCOPY
• Resolution: 2.50 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Structure Validation

Entry History 

& Funding Information

Deposition Data

• Released Date: 2025-05-28 
Deposition Author(s): Byrne, M.J., Sainsbury, F.

---

Funding Organization	Location	Grant Number
Australian Research Council (ARC)	Australia	--

Revision History  

• Version 1.0: 2025-05-28
  Type: Initial release