8PE8

Symmetry expanded D7 local refined map of mitochondrial heat-shock protein 60-like protein from Chaetomium thermophilum

PDB DOI: https://doi.org/10.2210/pdb8PE8/pdb
EM Map EMD-17629: EMDB EMDataResource

Classification: CHAPERONE
Organism(s): Thermochaetoides thermophila
Mutation(s): No

Deposited: 2023-06-13 Released: 2023-08-16
Deposition Author(s): Semchonok, D.A., Kyrilis, F.L., Hamdi, F., Kastritis, P.L.
Funding Organization(s): Not funded

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.46 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

Symmetry expanded D7, locally refined cryo-EM map of mitochondrial heat shock protein 60-like protein Chaetomium thermophilum.

Semchonok, D.A., Kyrilis, F.L., Hamdi, F., Kastritis, P.L.

To be published.

Macromolecule Content

Total Structure Weight: 849.37 kDa
Atom Count: 54,782
Modelled Residue Count: 7,392
Deposited Residue Count: 8,050
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Mitochondrial heat shock protein 60-like protein	A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N	575	Thermochaetoides thermophila	Mutation(s): 0
UniProt
Find proteins for G0RYB3 (Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719)) Explore G0RYB3 Go to UniProtKB: G0RYB3
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	G0RYB3
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 3.46 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

EM Software:

Task	Software Package	Version
MODEL REFINEMENT	PHENIX	1.20.1-4487
RECONSTRUCTION	cryoSPARC	3.2

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2023-08-16

Deposition Author(s):

Semchonok, D.A.

Kastritis, P.L.

Funding Organization	Location	Grant Number
Not funded		--

Revision History (Full details and data files)

Version 1.0: 2023-08-16
Type: Initial release

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.