8ODU

Chaetomium thermophilum Get1/Get2 heterotetramer in complex with a Get3 dimer (amphipol)


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 5.00 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

The GET insertase exhibits conformational plasticity and induces membrane thinning.

McDowell, M.A.Heimes, M.Enkavi, G.Farkas, A.Saar, D.Wild, K.Schwappach, B.Vattulainen, I.Sinning, I.

(2023) Nat Commun 14: 7355-7355

  • DOI: https://doi.org/10.1038/s41467-023-42867-2
  • Primary Citation of Related Structures:  
    8CQZ, 8CR1, 8CR2, 8ODU, 8ODV

  • PubMed Abstract: 

    The eukaryotic guided entry of tail-anchored proteins (GET) pathway mediates the biogenesis of tail-anchored (TA) membrane proteins at the endoplasmic reticulum. In the cytosol, the Get3 chaperone captures the TA protein substrate and delivers it to the Get1/Get2 membrane protein complex (GET insertase), which then inserts the substrate via a membrane-embedded hydrophilic groove. Here, we present structures, atomistic simulations and functional data of human and Chaetomium thermophilum Get1/Get2/Get3. The core fold of the GET insertase is conserved throughout eukaryotes, whilst thinning of the lipid bilayer occurs in the vicinity of the hydrophilic groove to presumably lower the energetic barrier of membrane insertion. We show that the gating interaction between Get2 helix α3' and Get3 drives conformational changes in both Get3 and the Get1/Get2 membrane heterotetramer. Thus, we provide a framework to understand the conformational plasticity of the GET insertase and how it remodels its membrane environment to promote substrate insertion.


  • Organizational Affiliation

    Heidelberg University Biochemistry Center (BZH), Im Neuenheimer Feld 328, 69120, Heidelberg, Germany. melanie.mcdowell@biophys.mpg.de.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
ATPase GET3
A, B
334Thermochaetoides thermophila DSM 1495Mutation(s): 0 
Gene Names: GET3CTHT_0061710
EC: 3.6
UniProt
Find proteins for G0SFE0 (Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
Explore G0SFE0 
Go to UniProtKB:  G0SFE0
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupG0SFE0
Sequence Annotations
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  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Protein GET2,Protein GET1
C, D
409Thermochaetoides thermophila DSM 1495Mutation(s): 0 
Gene Names: CTHT_0002670GET1CTHT_0013590
Membrane Entity: Yes 
UniProt
Find proteins for G0RZE4 (Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
Explore G0RZE4 
Go to UniProtKB:  G0RZE4
Find proteins for G0S1H2 (Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
Explore G0S1H2 
Go to UniProtKB:  G0S1H2
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupsG0S1H2G0RZE4
Sequence Annotations
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  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
ZN
Query on ZN

Download Ideal Coordinates CCD File 
E [auth A]ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 5.00 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
MODEL REFINEMENTPHENIX
RECONSTRUCTIONRELION3.0

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
German Research Foundation (DFG)GermanyLeibniz SI 586/6-1
German Research Foundation (DFG)GermanyTRR83 TP22

Revision History  (Full details and data files)

  • Version 1.0: 2023-11-29
    Type: Initial release