8KF9 | pdb_00008kf9

Stable G-quadruplex Conformation Formed in Promoter Region of Oncogene RET in 50 mM K+ solution

• PDB DOI: https://doi.org/10.2210/pdb8KF9/pdb
• NAKB: 8KF9

• Classification: DNA
• Organism(s): saltans group
• Mutation(s): No 


• Deposited: 2023-08-15 Released: 2024-09-04 
• Deposition Author(s): Zhang, Y.P., Lan, W.X., Yin, S.W., Liu, Z.J., Xue, H.J., Cao, C.Y.
• Funding Organization(s): National Natural Science Foundation of China (NSFC)

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 15 
• Selection Criteria: structures with the lowest energy 

Literature

Stable G-quadruplex Conformation Formed in Promoter Region of Oncogene RET Indicates New Target for Anti-cancer Drug Screening

Zhang, Y.P., Lan, W.X., Yin, S.W., Liu, Z.J., Xue, H.J., Cao, C.Y.

To be published.

Biological Assembly 1  

Biological assembly 1 assigned by authors and generated by (software)

Biological Assembly Evidence: NMR Distance Restraints

Macromolecule Content 

• Total Structure Weight: 6.71 kDa 
• Atom Count: 447 
• Modeled Residue Count: 21 
• Deposited Residue Count: 21 
• Unique nucleic acid chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Length	Organism	Image
DNA (5'-D(*GP*GP*GP*TP*AP*GP*GP*GP*GP*CP*GP*GP*GP*GP*CP*GP*GP*GP*GP*CP*G)-3')	A	21	saltans group

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 15 
• Selection Criteria: structures with the lowest energy 

Structure Validation

Entry History 

& Funding Information

Deposition Data

• Released Date: 2024-09-04 
Deposition Author(s): Zhang, Y.P., Lan, W.X., Yin, S.W., Liu, Z.J., Xue, H.J., Cao, C.Y.

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Funding Organization	Location	Grant Number
National Natural Science Foundation of China (NSFC)	China	21977110, 22177127, 22174155

Revision History  

• Version 1.0: 2024-09-04
  Type: Initial release