Crystal structure of HLA-A*11:01 in complex with KRAS G12R peptide (VVVGARGVGK)
Xu, Y.To be published.
Experimental Data Snapshot
Starting Model: experimental
View more details
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
HLA class I histocompatibility antigen, A alpha chain | 276 | Homo sapiens | Mutation(s): 3  Gene Names: HLA-A, HLAA | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P04439 (Homo sapiens) Explore P04439  Go to UniProtKB:  P04439 | |||||
PHAROS:  P04439 GTEx:  ENSG00000206503  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P04439 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Beta-2-microglobulin | 122 | Homo sapiens | Mutation(s): 0  Gene Names: B2M, CDABP0092, HDCMA22P | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P61769 (Homo sapiens) Explore P61769  Go to UniProtKB:  P61769 | |||||
PHAROS:  P61769 GTEx:  ENSG00000166710  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P61769 | ||||
Sequence AnnotationsExpand | |||||
|
Find similar proteins by: Sequence | 3D Structure
Entity ID: 3 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
KRAS G12V peptide (VVVGAVGVGK) | 10 | Homo sapiens | Mutation(s): 1  Gene Names: KRAS, KRAS2, RASK2 EC: 3.6.5.2 | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P01116 (Homo sapiens) Explore P01116  Go to UniProtKB:  P01116 | |||||
PHAROS:  P01116 GTEx:  ENSG00000133703  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P01116 | ||||
Sequence AnnotationsExpand | |||||
|
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 116.289 | α = 90 |
b = 121.845 | β = 90 |
c = 133.376 | γ = 90 |
Software Name | Purpose |
---|---|
PHENIX | phasing |
PHENIX | refinement |
Coot | model building |
XDS | data reduction |
Funding Organization | Location | Grant Number |
---|---|---|
Ministry of Science and Technology (MoST, China) | China | 2021YFA1302200 |