8JA2

ASFV Topoisomerase ATPase domain in complex with AMP-PNP and Mg2+


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.73 Å
  • R-Value Free: 0.216 
  • R-Value Work: 0.198 
  • R-Value Observed: 0.199 

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Ligand Structure Quality Assessment 


This is version 1.0 of the entry. See complete history


Literature

ASFV Topoisomerase ATPase domain in complex with AMP-PNP and Mg2+

Pang, A.H.Chang, C.-W.Tsai, M.-D.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
DNA topoisomerase 2408African swine fever virusMutation(s): 0 
Gene Names: P1192R
UniProt
Find proteins for A0A0A1E3Q0 (African swine fever virus)
Explore A0A0A1E3Q0 
Go to UniProtKB:  A0A0A1E3Q0
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A0A1E3Q0
Sequence Annotations
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  • Reference Sequence
Small Molecules
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.73 Å
  • R-Value Free: 0.216 
  • R-Value Work: 0.198 
  • R-Value Observed: 0.199 
  • Space Group: P 61 2 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 85.921α = 90
b = 85.921β = 90
c = 212.01γ = 120
Software Package:
Software NamePurpose
PHENIXrefinement
PHENIXrefinement
PDB_EXTRACTdata extraction
XDSdata reduction
SCALAdata scaling
BALBESphasing

Structure Validation

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Ligand Structure Quality Assessment 


Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Academia Sinica (Taiwan)TaiwanPostdoctoral Research Scholar Program
Academia Sinica (Taiwan)TaiwanAS-KPQ-109-TPP2

Revision History  (Full details and data files)

  • Version 1.0: 2024-02-07
    Type: Initial release