Structural and functional analysis of pyruvic oxime dioxygenase, a key enzyme of heterotrophic nitrification
Tsujino, S., Yamada, Y., Senda, M., Senda, T., Fujiwara, T.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Aldolase | 264 | Bradyrhizobium sp. WSM3983 | Mutation(s): 0  | ![]() | |
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SO4 Query on SO4 | C [auth A], D [auth A], E [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
NI Query on NI | B [auth A] | NICKEL (II) ION Ni VEQPNABPJHWNSG-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 153.896 | α = 90 |
b = 153.896 | β = 90 |
c = 153.896 | γ = 90 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
autoPROC | data processing |
CRANK2 | phasing |
XDS | data scaling |
Funding Organization | Location | Grant Number |
---|---|---|
Ministry of Education, Culture, Sports, Science and Technology (Japan) | Japan | 21K12220 |
Ministry of Education, Culture, Sports, Science and Technology (Japan) | Japan | 17K00517 |