Crystal structure of a TCR in complex with HLA-A*11:01 bound to KRAS peptide (VVGAVGVGK)
Lu, D., Chen, Y., Jiang, M., Tan, S.G., Chai, Y., Gao, G.F.(2023) Nat Commun 
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
MHC class I antigen (Fragment) | A [auth H] | 274 | Homo sapiens | Mutation(s): 2  Gene Names: HLA-A | |
UniProt | |||||
Find proteins for U5YJJ6 (Homo sapiens) Explore U5YJJ6  Go to UniProtKB:  U5YJJ6 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | U5YJJ6 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Beta-2-microglobulin | B [auth L] | 99 | Homo sapiens | Mutation(s): 0  Gene Names: B2M | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P61769 (Homo sapiens) Explore P61769  Go to UniProtKB:  P61769 | |||||
PHAROS:  P61769 GTEx:  ENSG00000166710  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P61769 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by: Sequence | 3D Structure
Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
KRAS-G12wt-9 | C [auth P] | 9 | Homo sapiens | Mutation(s): 0  EC: 3.6.5.2 | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P01116 (Homo sapiens) Explore P01116  Go to UniProtKB:  P01116 | |||||
PHAROS:  P01116 GTEx:  ENSG00000133703  | |||||
Entity Groups   | |||||
UniProt Group | P01116 | ||||
Sequence AnnotationsExpand | |||||
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Length ( Å ) | Angle ( ˚ ) |
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a = 49.14 | α = 90 |
b = 67.697 | β = 100.88 |
c = 73.1 | γ = 90 |
Software Name | Purpose |
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HKL-2000 | data reduction |
PHENIX | refinement |
Coot | model building |
HKL-2000 | data scaling |
MOLREP | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
National Natural Science Foundation of China (NSFC) | China | 2022YFC2302900 |
National Natural Science Foundation of China (NSFC) | China | 2021YFC2301400 |
National Natural Science Foundation of China (NSFC) | China | 92169208 |
National Natural Science Foundation of China (NSFC) | China | 32222031 |