8HPX

Structure of mouse LGI1 LRR domain in space group P65

  • Classification: SIGNALING PROTEIN
  • Organism(s): Mus musculus
  • Expression System: Homo sapiens
  • Mutation(s): No 

  • Deposited: 2022-12-13 Released: 2023-12-13 
  • Deposition Author(s): Liu, H., Xu, F.
  • Funding Organization(s): National Natural Science Foundation of China (NSFC)

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.68 Å
  • R-Value Free: 0.251 
  • R-Value Work: 0.220 
  • R-Value Observed: 0.222 

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Literature

Structure of mouse LGI1 LRR domain in space group P65

Liu, H., Xu, F.

To be published.

Macromolecules
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(by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Leucine-rich glioma-inactivated protein 1
A, B
202Mus musculusMutation(s): 0 
Gene Names: Lgi1
UniProt
Find proteins for Q9JIA1 (Mus musculus)
Explore Q9JIA1 
Go to UniProtKB:  Q9JIA1
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9JIA1
Sequence Annotations
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  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
NAG
Query on NAG
Download Ideal Coordinates CCD File 
C [auth A],
D [auth B]		2-acetamido-2-deoxy-beta-D-glucopyranose
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.68 Å
  • R-Value Free: 0.251 
  • R-Value Work: 0.220 
  • R-Value Observed: 0.222 
  • Space Group: P 65
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 90.952α = 90
b = 90.952β = 90
c = 191.228γ = 120
Software Package:
Software NamePurpose
PHENIXrefinement
HKL-2000data reduction
HKL-2000data scaling
PHASERphasing

Structure Validation

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Entry History & Funding Information

Deposition Data

  • Released Date: 2023-12-13 
    • Deposition Author(s): Liu, H., Xu, F.
Funding OrganizationLocationGrant Number
National Natural Science Foundation of China (NSFC)China31270767

Revision History  (Full details and data files)

  • Version 1.0: 2023-12-13
    Type: Initial release