8HHF | pdb_00008hhf

The bacterial divisome protein complex FtsB-FtsL-FtsQ

PDB DOI: https://doi.org/10.2210/pdb8HHF/pdb

Classification: MEMBRANE PROTEIN
Organism(s): Escherichia coli K-12
Expression System: Escherichia coli
Mutation(s): Yes
Membrane Protein: Yes OPM PDBTM mpstruc

Deposited: 2022-11-16 Released: 2023-04-26
Deposition Author(s): Nguyen, V.H.T., Chen, X.
Funding Organization(s): Academia Sinica (Taiwan)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.04 Å
R-Value Free:
0.294 (Depositor), 0.316 (DCC)
R-Value Work:
0.270 (Depositor), 0.279 (DCC)
R-Value Observed:
0.271 (Depositor)

Starting Model: experimental
View more details

wwPDB Validation 3D Report Full Report

This is version 1.2 of the entry. See complete history.

Literature

Structure of the heterotrimeric membrane protein complex FtsB-FtsL-FtsQ of the bacterial divisome.

Nguyen, H.T.V., Chen, X., Parada, C., Luo, A.C., Shih, O., Jeng, U.S., Huang, C.Y., Shih, Y.L., Ma, C.

(2023) Nat Commun 14: 1903-1903

PubMed: 37019934 Search on PubMed Search on PubMed Central
DOI: https://doi.org/10.1038/s41467-023-37543-4
Primary Citation Related Structures:
8HHF, 8HHG, 8HHH

PubMed Abstract:
The synthesis of the cell-wall peptidoglycan during bacterial cell division is mediated by a multiprotein machine, called the divisome. The essential membrane protein complex of FtsB, FtsL and FtsQ (FtsBLQ) is at the heart of the divisome assembly cascade in Escherichia coli. This complex regulates the transglycosylation and transpeptidation activities of the FtsW-FtsI complex and PBP1b via coordination with FtsN, the trigger for the onset of constriction. Yet the underlying mechanism of FtsBLQ-mediated regulation is largely unknown. Here, we report the full-length structure of the heterotrimeric FtsBLQ complex, which reveals a V-shaped architecture in a tilted orientation. Such a conformation could be strengthened by the transmembrane and the coiled-coil domains of the FtsBL heterodimer, as well as an extended β-sheet of the C-terminal interaction site involving all three proteins. This trimeric structure may also facilitate interactions with other divisome proteins in an allosteric manner. These results lead us to propose a structure-based model that delineates the mechanism of the regulation of peptidoglycan synthases by the FtsBLQ complex.

Organizational Affiliation

Genomics Research Center, Academia Sinica, Taipei, 115, Taiwan.

Macromolecule Content

Total Structure Weight: 58.59 kDa
Atom Count: 3,286
Modeled Residue Count: 409
Deposited Residue Count: 516
Unique protein chains: 3

Macromolecules

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| 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Cell division protein FtsQ	A [auth Q]	276	Escherichia coli K-12	Mutation(s): 0 Gene Names: ftsQ, A9X72_20810, ACU57_16060, BGM66_003029, BN17_45151, BO068_001919, BON68_06480, BON72_08970, BON73_04910, BON74_02170... ftsQ, A9X72_20810, ACU57_16060, BGM66_003029, BN17_45151, BO068_001919, BON68_06480, BON72_08970, BON73_04910, BON74_02170, BON75_16740, BON76_15060, BON77_21520, BON80_15910, BON89_27020, BON93_20085, BON94_26730, BvCmsHHP019_03716, C5Y87_12070, CCS08_22990, CR538_21045, CTR35_001627, DAH19_13315, DAH50_07465, DS732_05370, DTL43_06330, DXT70_08670, E2119_07785, E2134_11600, E4K51_06165, E5P23_04335, E5P31_03955, E5P32_08015, E5P35_00730, E5P36_04260, E5P39_13665, E5P40_07375, E5P41_14185, E5P42_01010, E5P43_09200, E5P44_09730, E5P45_08355, E5P46_13085, E5P47_04370, E5P48_12150, E5P49_11070, E5P50_01390, E5S36_10750, E5S51_07905, EI021_04715, EIZ93_07570, EL79_3779, EL80_3726, ELT20_04095, ELT41_01600, ELX85_12445, F2N20_00540, F2N31_00540, F9V24_01135, FJQ40_06395, FOI11_013215, FOI11_22465, FV293_03270, FWK02_17275, GJO56_09885, GKF89_02115, GNW61_10395, GP944_03500, GP965_07730, GP979_06755, GRW05_06695, HMV95_04965, HX136_20990, IH768_05560, J0541_002403, JNP96_04660, NCTC11126_03516, NCTC13216_02643, NCTC8008_03748, NCTC8500_04640, NCTC9037_04264, NCTC9045_04807, NCTC9117_05152, NCTC9706_01498, SAMEA3751407_02594, SAMEA3752557_00798 Membrane Entity: Yes
UniProt
Find proteins for P06136 (Escherichia coli (strain K12)) Explore P06136 Go to UniProtKB: P06136
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P06136
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
Cell division protein FtsB	B	119	Escherichia coli K-12	Mutation(s): 1 Gene Names: ygbQ, b2748, ftsB, A6592_02700, A9X72_05420, AAG43_001157, AAS29_002327, ACN68_01085, ACN81_22700, ACU57_10415... ygbQ, b2748, ftsB, A6592_02700, A9X72_05420, AAG43_001157, AAS29_002327, ACN68_01085, ACN81_22700, ACU57_10415, AF998_003984, AM464_05440, APX88_26425, AT335_001935, AT845_002951, AW118_02170, AW119_00505, B6R12_002921, B6R15_004315, B6R31_001385, B6R48_002213, B6R87_001779, BANRA_03605, BANRA_03816, BEA19_14400, BER14_04895, BF481_001551, BG944_005039, BGM66_001300, BHS81_16470, BJI68_04455, BJJ90_05425, BK292_23370, BK383_11510, BKL28_002147, BLM69_002676, BMC79_001641, BMT50_16440, BMT91_16935, BN17_26281, BO068_003238, BOH76_22505, BON63_19750, BON64_10250, BON65_10655, BON67_16550, BON68_07845, BON69_14865, BON70_14165, BON71_18350, BON72_06905, BON73_04200, BON74_11250, BON75_11915, BON76_10600, BON77_23390, BON80_04815, BON81_09700, BON82_02555, BON83_09775, BON86_17645, BON87_00170, BON89_01935, BON92_08965, BON93_21085, BON94_04190, BON95_16370, BON96_25220, BON97_25970, BON98_24845, BR331_13510, BRV02_002856, BRV34_003183, BRV41_003345, BTB68_002198, BTQ06_25695, BUO55_002741, BvCmsF30A_03976, BvCmsHHP019_05490, BvCmsHHP056_03513, BvCmsKKP036_03957, BvCmsKKP061_02287, BvCmsKSNP073_04237, BVL39_13140, BXT93_22835, BZL69_02290, C0P57_004097, C1Q91_001211, C2R31_001402, C5N07_05990, C5Y87_14880, C9114_19275, C9160_11615, C9E67_06290, C9Z68_11480, CA593_13145, CCS08_05870, CDC27_14480, CDL36_10580, CDL37_05475, CF22_001372, CG831_002442, CHM61_004550, CIG67_14820, CO706_11605, CQ986_002524, CQB02_03210, CR538_05670, CR539_18670, CTR35_002600, CV83915_03375, CWS33_18255, CX938_003723, CXJ73_001678, CY655_17660, D0X26_15425, D3822_00190, D3Y67_06265, D9D43_16505, D9D77_00530, D9E34_04515, D9H94_08045, D9J03_06940, DAH17_11780, DAH18_08090, DAH19_15820, DAH20_05945, DAH21_20810, DAH22_00530, DAH23_03755, DAH24_03765, DAH25_05315, DAH26_03760, DAH27_03345, DAH28_03335, DAH29_09130, DAH30_04850, DAH31_08600, DAH32_02190, DAH33_08870, DAH34_12005, DAH35_08065, DAH36_13970, DAH37_01500, DAH38_06765, DAH40_04515, DAH41_01770, DAH42_02270, DAH43_05505, DAH45_03780, DAH46_05500, DAH47_03040, DAH48_01310, DAH49_04735, DAH50_09730, DD762_14720, DEN86_01675, DEN87_06010, DEN88_12480, DEN89_06010, DEN90_07595, DEN91_04170, DEN92_03855, DEN93_00690, DEN94_03985, DEN95_06590, DEN96_04540, DEN97_04105, DEN98_04110, DEN99_01465, DEO00_03540, DEO01_04750, DEO02_05355, DEO03_10945, DEO04_03070, DEO05_03065, DEO06_14675, DEO07_14800, DEO08_11655, DEO09_03070, DEO10_04970, DEO11_04985, DEO12_05285, DEO13_04860, DEO14_10405, DEO15_03720, DEO17_10685, DEO18_14335, DEO19_03885, DEO20_03780, DIV22_15835, DKP82_11040, DM870_03105, DN627_19300, DNX30_08755, DRW19_11595, DS732_20520, DTL43_09190, DTL90_02495, DTM45_13710, DU321_05970, DXT69_17360, DXT70_08325, DXT71_19650, DXT73_08240, E0I42_15505, E2112_09555, E2113_09350, E2114_10320, E2115_08525, E2116_15190, E2117_09815, E2118_09245, E2119_10765, E2120_14915, E2121_02015, E2122_11735, E2123_09600, E2124_11825, E2125_14100, E2127_10965, E2128_08105, E2129_22705, E2130_14460, E2131_15845, E2132_11790, E2133_06760, E2134_08305, E2135_15680, E2136_06425, E4K51_11225, E4T14_21585, E5H86_04825, E5M02_10925, E5P22_05770, E5P23_03445, E5P24_05600, E5P25_11055, E5P26_11690, E5P27_02515, E5P28_09905, E5P29_13475, E5P30_13810, E5P31_11865, E5P32_06050, E5P33_06685, E5P34_03510, E5P35_05585, E5P36_12075, E5P37_18585, E5P39_08565, E5P40_04955, E5P41_03935, E5P42_06115, E5P43_04960, E5P44_06155, E5P45_05830, E5P46_03860, E5P47_08365, E5P48_08500, E5P49_06610, E5P50_05955, E5P51_10505, E5P52_10315, E5S34_04800, E5S35_14100, E5S36_19180, E5S37_09785, E5S38_04045, E5S39_15870, E5S42_03440, E5S43_09080, E5S44_15530, E5S45_15150, E5S46_13650, E5S47_05125, E5S48_06165, E5S51_18450, E5S52_14265, E5S53_09375, E5S54_10235, E5S55_08335, E5S56_08850, E5S57_00290, E5S58_00490, E5S61_16790, E5S62_06130, E6D34_14775, EAI46_07250, EAN77_13820, EAX79_09035, EC1094V2_948, EC95NR1_01987, ECs3602, ED648_01345, EHD79_13700, EI021_10985, EIA08_07110, EIZ93_05810, EKI52_20755, EL79_0951, EL80_0954, ELT17_12700, ELT20_17240, ELT21_23265, ELT27_11215, ELT28_05140, ELT29_12425, ELT41_08750, ELT49_08555, ELT51_15170, ELT58_07355, ELU85_05930, ELU90_11220, ELU99_13270, ELV08_08070, ELV09_15590, ELV10_02555, ELV15_03805, ELV16_00560, ELV21_04885, ELV26_12080, ELV28_12555, ELV40_02705, ELX48_08725, ELX61_07165, ELX66_15205, ELX69_11900, ELX76_04460, ELX85_04260, ELX96_07925, ELY02_14155, ELY32_16870, ELY36_13285, ELY39_04535, ELY41_01415, ELY48_08790, EN85_001469, ERS139208_02413, ExPECSC038_01238, EXX13_06030, EYV17_10490, EYV18_03170, EYX47_08185, F0L67_14180, F2N20_16730, F2N31_16335, F3N40_16780, F7N46_14340, F9461_10345, F9B07_08855, F9S83_03495, F9V24_05845, FDM60_13010, FFF58_10515, FGG80_17910, FHO90_00450, FHQ91_11950, FIJ20_09535, FJQ40_08620, FJQ51_01270, FJQ53_01475, FKO60_18855, FOI11_00770, FOI11_022410, FPJ29_02580, FPS11_13985, FQF29_08350, FV293_17625, FVB16_11015, FWK02_01495, FY127_09825, G3813_002375, G3V95_10445, G4A38_14890, G4A47_01820, G5603_07050, G7630_001935, G9448_20130, GAI66_02250, GAI89_18445, GAJ12_00705, GAJ26_13810, GF699_10330, GFY34_09225, GIB53_20945, GJ11_17855, GJO56_21000, GKF66_22940, GKF89_15865, GNW61_10135, GNZ05_06795, GOP25_06480, GP944_20765, GP954_16030, GP965_19000, GP975_18645, GQM04_19210, GQM13_06950, GQM21_22525, GQW68_02525, GQW80_08720, GRW05_19835, GRW24_26615, GRW56_12285, GRW57_13710, GSM54_10720, GSY44_11250, GTP88_14390, GUC01_18635, H0O37_18560, H0O39_10000, H0O72_12700, HEP30_016230, HEP34_003091, HHH44_000061, HJ942_003313, HJQ60_000143, HJS37_003746, HJU54_000976, HKA49_002448, HL563_12225, HL601_05720, HLV18_00605, HLX92_15920, HLZ50_16935, HMJ82_10310, HMV95_03780, HNC36_10085, HNC59_00675, HNC66_02820, HNC99_10495, HND12_16955, HV109_05095, HV146_18020, HV209_17635, HVW04_21435, HVW19_09715, HVW43_22665, HVX32_16115, HVY77_05890, HVZ29_16240, HVZ71_05535, HX136_05215, I6H00_23980, I6H01_07705, I6H02_09220, IA00_004614, IH768_16030, IH772_07675, IT029_001852, J0541_002488, J4S20_000102, J5U05_001032, JE86ST02C_32090, JE86ST05C_32140, JFD_05027, JNP96_21365, NCTC10082_03501, NCTC10090_04155, NCTC10764_00342, NCTC10865_01399, NCTC10974_01325, NCTC11126_05099, NCTC11181_03313, NCTC11341_01150, NCTC13127_01476, NCTC13216_00792, NCTC4450_03076, NCTC7922_03113, NCTC8008_00547, NCTC8179_06727, NCTC8333_01272, NCTC8450_05688, NCTC8500_01136, NCTC8960_03819, NCTC9036_01170, NCTC9037_01265, NCTC9044_00531, NCTC9045_01252, NCTC9073_04844, NCTC9077_01455, NCTC9111_01553, NCTC9117_01643, NCTC9702_01334, NCTC9706_03334, NCTC9775_04881, NCTC9777_02739, NCTC9962_05400, ND22_002843, RG28_07850, SAMEA3472044_02733, SAMEA3472056_03187, SAMEA3472147_02219, SAMEA3751407_03499, SAMEA3752557_03775, SAMEA3753106_02570, TUM18780_09890, WP4S18E07_10690, WR15_05115 Membrane Entity: Yes
UniProt
Find proteins for P0A6S5 (Escherichia coli (strain K12)) Explore P0A6S5 Go to UniProtKB: P0A6S5
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P0A6S5
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 3
Molecule	Chains	Sequence Length	Organism	Details	Image
Cell division protein FtsL	C [auth L]	121	Escherichia coli K-12	Mutation(s): 0 Gene Names: ftsL Membrane Entity: Yes
UniProt
Find proteins for P0AEN4 (Escherichia coli (strain K12)) Explore P0AEN4 Go to UniProtKB: P0AEN4
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P0AEN4
Sequence Annotations Expand
Reference Sequence