8HCY

Legionella glycosyltransferase

• PDB DOI: https://doi.org/10.2210/pdb8HCY/pdb

• Classification: TRANSFERASE
• Organism(s): Legionella
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2022-11-03 Released: 2023-11-08 
• Deposition Author(s): Chen, T.T., Ouyang, S.Y.
• Funding Organization(s): National Natural Science Foundation of China (NSFC)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.64 Å
• R-Value Free: 0.256 
• R-Value Work: 0.240 
• R-Value Observed: 0.240 

Literature

Legionella glycosyltransferase

Chen, T.T., Ouyang, S.Y.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Biological Assembly 2  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 2 assigned by authors.

Biological Assembly 3  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 3 assigned by authors.

Biological Assembly 4  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 4 assigned by authors.

Macromolecule Content

• Total Structure Weight: 394.46 kDa 
• Atom Count: 16,216 
• Modelled Residue Count: 1,996 
• Deposited Residue Count: 3,460 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Dot/Icm secretion system substrate	A [auth C], B [auth A], C [auth B], D	865	Legionella	Mutation(s): 0  Gene Names: C3927_06670
UniProt
Find proteins for Q5ZVF2 (Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)) Explore Q5ZVF2  Go to UniProtKB:  Q5ZVF2

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.64 Å
• R-Value Free: 0.256 
• R-Value Work: 0.240 
• R-Value Observed: 0.240 
• Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 92.361	α = 90
b = 112.615	β = 108.143
c = 125.795	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
xia2	data reduction
xia2	data scaling
PHASER	phasing

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2023-11-08 
Deposition Author(s): Chen, T.T., Ouyang, S.Y.

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Funding Organization	Location	Grant Number
National Natural Science Foundation of China (NSFC)	China	--

Revision History  

• Version 1.0: 2023-11-08
  Type: Initial release