Download MendeleyCrystal structure of the N-terminal domain of H-NS family protein TurB (TurB_nt50)
Vasileva, D., Suzuki-Minakuchi, C., Arakawa, T., Nojiri, H.To be published.
8H8H
Crystal structure of the N-terminal domain of H-NS family protein TurB (TurB_nt50)
- PDB DOI: https://doi.org/10.2210/pdb8H8H/pdb
- Classification: TRANSCRIPTION
- Organism(s): Pseudomonas putida KT2440
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2022-10-22 Released: 2022-11-09
- Funding Organization(s): Japan Society for the Promotion of Science (JSPS), Japan Science and Technology
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.70 Å
- R-Value Free: 0.285
- R-Value Work: 0.246
- R-Value Observed: 0.251
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| H-NS family protein MvaT | 58 | Pseudomonas putida KT2440 | Mutation(s): 0 Gene Names: PP_3765 |  | |
UniProt | |||||
Find proteins for Q88GF9 (Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)) Explore Q88GF9 Go to UniProtKB: Q88GF9 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q88GF9 | ||||
Sequence AnnotationsExpand | |||||
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Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.70 Å
- R-Value Free: 0.285
- R-Value Work: 0.246
- R-Value Observed: 0.251
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 45.692 | α = 90 |
| b = 63.303 | β = 90 |
| c = 275.872 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| XDS | data reduction |
| Aimless | data scaling |
| CRANK2 | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2022-11-09 Deposition Author(s): Vasileva, D., Suzuki-Minakuchi, C., Arakawa, T., Nojiri, H.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Japan Society for the Promotion of Science (JSPS) | Japan | 18K05408 |
| Japan Society for the Promotion of Science (JSPS) | Japan | 21H02097 |
| Japan Science and Technology | Japan | JPMJER1502 |
Revision History (Full details and data files)
- Version 1.0: 2022-11-09
Type: Initial release
