8H3I

Crystal Structure of the apo-form Pathogenesis-related Protein HcPR10 from Halostachys caspica

PDB DOI: https://doi.org/10.2210/pdb8H3I/pdb

Classification: ALLERGEN
Organism(s): Halostachys caspica
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2022-10-08 Released: 2023-05-17
Deposition Author(s): Wang, Z., Ren, Y.
Funding Organization(s): National Natural Science Foundation of China (NSFC)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.90 Å
R-Value Free: 0.248
R-Value Work: 0.199
R-Value Observed: 0.201

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Halostachys caspica pathogenesis-related protein 10 acts as a cytokinin reservoir to regulate plant growth and development

Feng, Y., Ren, Y., Zhang, H., Heng, Y., Wang, Z., Wang, Y.

(2023) Front Plant Sci 14: 1116985

DOI: https://doi.org/https://doi.org/10.3389/fpls.2023.1116985

Macromolecule Content

Total Structure Weight: 18.18 kDa
Atom Count: 1,365
Modelled Residue Count: 162
Deposited Residue Count: 163
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
PR10	A	163	Halostachys caspica	Mutation(s): 0
UniProt
Find proteins for A0A171NYA8 (Halostachys caspica) Explore A0A171NYA8 Go to UniProtKB: A0A171NYA8
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	A0A171NYA8
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.90 Å
R-Value Free: 0.248
R-Value Work: 0.199
R-Value Observed: 0.201
Space Group: P 3₂ 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 59.426	α = 90
b = 59.426	β = 90
c = 92.023	γ = 120

Software Package:

Software Name	Purpose
PHENIX	refinement
HKL-2000	data reduction
HKL-2000	data scaling
PHENIX	phasing

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2023-05-17

Deposition Author(s):

Funding Organization	Location	Grant Number
National Natural Science Foundation of China (NSFC)	China	32125008

Revision History (Full details and data files)

Version 1.0: 2023-05-17
Type: Initial release
Version 1.1: 2023-11-08
Changes: Data collection, Refinement description

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.