8H0J

Annexin A5 mutant

• PDB DOI: https://doi.org/10.2210/pdb8H0J/pdb

• Classification: LIPID BINDING PROTEIN
• Organism(s): Homo sapiens
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2022-09-29 Released: 2023-10-04 
• Deposition Author(s): Hua, Z.C., Tang, W.
• Funding Organization(s): National Natural Science Foundation of China (NSFC)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.23 Å
• R-Value Free: 0.246 
• R-Value Work: 0.188 
• R-Value Observed: 0.191 

Literature

structure dissection of the membrane aggregation mechanism induced by Annexin A5 mutation

Hua, Z.C., Tang, W.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors and generated by PISA (software)

Biological Assembly Evidence: gel filtration

Macromolecule Content

• Total Structure Weight: 36.21 kDa 
• Atom Count: 2,713 
• Modelled Residue Count: 319 
• Deposited Residue Count: 321 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Annexin A5	A	321	Homo sapiens	Mutation(s): 0  Gene Names: ANXA5, ANX5, ENX2, PP4
UniProt & NIH Common Fund Data Resources
Find proteins for P08758 (Homo sapiens) Explore P08758  Go to UniProtKB:  P08758
PHAROS:  P08758 GTEx:  ENSG00000164111

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
CA (Subject of Investigation/LOI)	B [auth A], C [auth A], D [auth A], E [auth A], F [auth A]	CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.23 Å
• R-Value Free: 0.246 
• R-Value Work: 0.188 
• R-Value Observed: 0.191 
• Space Group: C 2 2 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 69.294	α = 90
b = 134.47	β = 90
c = 79.227	γ = 90

Software Package:

Software Name	Purpose
HKL-2000	data scaling
PHENIX	refinement
PDB_EXTRACT	data extraction
HKL-2000	data reduction
PHENIX	phasing

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2023-10-04 
Deposition Author(s): Hua, Z.C., Tang, W.

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Funding Organization	Location	Grant Number
National Natural Science Foundation of China (NSFC)	China	81630092

Revision History  

• Version 1.0: 2023-10-04
  Type: Initial release