Cryo-EM structure of Escherichia coli cytochrome bo3 in DDM detergent
Cao, H.Y., Li, K., Li, C.Y.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Cytochrome bo(3) ubiquinol oxidase subunit 1 | 663 | Escherichia coli K-12 | Mutation(s): 0  EC: 7.1.1.3 Membrane Entity: Yes  | ||
UniProt | |||||
Find proteins for P0ABI8 (Escherichia coli (strain K12)) Explore P0ABI8  Go to UniProtKB:  P0ABI8 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0ABI8 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Cytochrome bo(3) ubiquinol oxidase subunit 2 | 315 | Escherichia coli K-12 | Mutation(s): 0  Membrane Entity: Yes  | ||
UniProt | |||||
Find proteins for P0ABJ1 (Escherichia coli (strain K12)) Explore P0ABJ1  Go to UniProtKB:  P0ABJ1 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0ABJ1 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
ubiquinol oxidase | 204 | Escherichia coli K-12 | Mutation(s): 0  Membrane Entity: Yes  | ||
UniProt | |||||
Find proteins for P0ABJ3 (Escherichia coli (strain K12)) Explore P0ABJ3  Go to UniProtKB:  P0ABJ3 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0ABJ3 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 4 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Cytochrome bo(3) ubiquinol oxidase subunit 4 | 109 | Escherichia coli K-12 | Mutation(s): 0  Membrane Entity: Yes  | ||
UniProt | |||||
Find proteins for P0ABJ6 (Escherichia coli (strain K12)) Explore P0ABJ6  Go to UniProtKB:  P0ABJ6 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0ABJ6 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 5 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
HEO Query on HEO | F [auth A] | HEME O C49 H58 Fe N4 O5 FRKORVCRVCLRBA-BZKSIRDQSA-L | |||
3PE Query on 3PE | I [auth A], J [auth C] | 1,2-Distearoyl-sn-glycerophosphoethanolamine C41 H82 N O8 P LVNGJLRDBYCPGB-LDLOPFEMSA-N | |||
UQ8 Query on UQ8 | H [auth A] | Ubiquinone-8 C49 H74 O4 ICFIZJQGJAJRSU-SGHXUWJISA-N | |||
HEM Query on HEM | E [auth A] | PROTOPORPHYRIN IX CONTAINING FE C34 H32 Fe N4 O4 KABFMIBPWCXCRK-RGGAHWMASA-L | |||
CU Query on CU | G [auth A] | COPPER (II) ION Cu JPVYNHNXODAKFH-UHFFFAOYSA-N |
Funding Organization | Location | Grant Number |
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Not funded | -- |