Download MendeleyCrystal Structure of Glycylpeptide N-tetradecanoyltransferase (N-myristoyl transferase) (NMT) from Leishmania major Friedlin bound to tetradecanoyl-CoA (Orthorhombic P Form 3)
Lovell, S., Battaile, K.P., Staker, B.L., Liu, L.To be published.
8FI6
Crystal Structure of Glycylpeptide N-tetradecanoyltransferase (N-myristoyl transferase) (NMT) from Leishmania major Friedlin bound to tetradecanoyl-CoA (Orthorhombic P Form 3)
- PDB DOI: https://doi.org/10.2210/pdb8FI6/pdb
- Classification: TRANSFERASE
- Organism(s): Leishmania major strain Friedlin
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): Yes
- Deposited: 2022-12-15 Released: 2022-12-28
- Funding Organization(s): National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID), National Institutes of Health/Office of the Director
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.80 Å
- R-Value Free: 0.211
- R-Value Work: 0.165
- R-Value Observed: 0.167
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Glycylpeptide N-tetradecanoyltransferase | A | 425 | Leishmania major strain Friedlin | Mutation(s): 1 Gene Names: LMJFC_320006100 |  |
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Protein Feature ViewExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| MYA (Subject of Investigation/LOI) Query on MYA | B [auth A] | TETRADECANOYL-COA C35 H62 N7 O17 P3 S DUAFKXOFBZQTQE-GLTUGWJXDB |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.80 Å
- R-Value Free: 0.211
- R-Value Work: 0.165
- R-Value Observed: 0.167
- Space Group: P 21 21 21
- Diffraction Data: https://doi.org/10.18430/M38FI6
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 55.809 | α = 90 |
| b = 88.62 | β = 90 |
| c = 92.49 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| Aimless | data scaling |
| XDS | data reduction |
| PHASER | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2022-12-28 Deposition Author(s): Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
| Funding Organization | Location | Grant Number |
|---|---|---|
| National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID) | United States | 75N93022C00036 |
| National Institutes of Health/Office of the Director | United States | OD030394 |
Revision History (Full details and data files)
- Version 1.0: 2022-12-28
Type: Initial release
