8FCK | pdb_00008fck

Structure of the vertebrate augmin complex


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 6.88 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

Integrated model of the vertebrate augmin complex.

Travis, S.M.Mahon, B.P.Huang, W.Ma, M.Rale, M.J.Kraus, J.Taylor, D.J.Zhang, R.Petry, S.

(2023) Nat Commun 14: 2072-2072

  • DOI: https://doi.org/10.1038/s41467-023-37519-4
  • Primary Citation of Related Structures:  
    8FCK

  • PubMed Abstract: 

    Accurate segregation of chromosomes is required to maintain genome integrity during cell division. This feat is accomplished by the microtubule-based spindle. To build a spindle rapidly and with high fidelity, cells take advantage of branching microtubule nucleation, which rapidly amplifies microtubules during cell division. Branching microtubule nucleation relies on the hetero-octameric augmin complex, but lack of structure information about augmin has hindered understanding how it promotes branching. In this work, we combine cryo-electron microscopy, protein structural prediction, and visualization of fused bulky tags via negative stain electron microscopy to identify the location and orientation of each subunit within the augmin structure. Evolutionary analysis shows that augmin's structure is highly conserved across eukaryotes, and that augmin contains a previously unidentified microtubule binding site. Thus, our findings provide insight into the mechanism of branching microtubule nucleation.


  • Organizational Affiliation
    • Department of Molecular Biology, Princeton University, Princeton, NJ, USA.

Macromolecules
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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
HAUS augmin-like complex subunit 1286Xenopus laevisMutation(s): 0 
Gene Names: haus1.L
UniProt
Find proteins for A0A8J1L9M8 (Xenopus laevis)
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UniProt GroupA0A8J1L9M8
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
HAUS augmin-like complex subunit 3597Xenopus laevisMutation(s): 0 
Gene Names: haus3
UniProt
Find proteins for Q6DCY9 (Xenopus laevis)
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UniProt GroupQ6DCY9
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
HAUS augmin like complex subunit 4 L homeolog353Xenopus laevisMutation(s): 0 
Gene Names: haus4.Lhaus4MGC115689
UniProt
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Entity ID: 4
MoleculeChains Sequence LengthOrganismDetailsImage
HAUS augmin-like complex subunit 5666Xenopus laevisMutation(s): 0 
Gene Names: haus5.L
UniProt
Find proteins for A0A1L8FPI2 (Xenopus laevis)
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UniProt GroupA0A1L8FPI2
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Entity ID: 5
MoleculeChains Sequence LengthOrganismDetailsImage
HAUS augmin like complex subunit 2 L homeolog, Green fluorescent protein chimera472Xenopus laevisMutation(s): 0 
Gene Names: haus2.Lcep27haus2MGC82377GFP
UniProt
Find proteins for P42212 (Aequorea victoria)
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Find proteins for Q6INL9 (Xenopus laevis)
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UniProt GroupsQ6INL9P42212
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Entity ID: 6
MoleculeChains Sequence LengthOrganismDetailsImage
HAUS augmin like complex subunit 6 L homeolog442Xenopus laevisMutation(s): 0 
Gene Names: haus6.L
UniProt
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Entity ID: 7
MoleculeChains Sequence LengthOrganismDetailsImage
HAUS augmin like complex subunit 7 S homeolog348Xenopus laevisMutation(s): 0 
Gene Names: haus7.Shaus7LOC100158301uchl5ipuip1
UniProt
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Entity ID: 8
MoleculeChains Sequence LengthOrganismDetailsImage
HAUS augmin-like complex subunit 8367Xenopus laevisMutation(s): 0 
Gene Names: haus8hice1
UniProt
Find proteins for Q0IHJ3 (Xenopus laevis)
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Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 6.88 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
MODEL REFINEMENTPHENIX
RECONSTRUCTIONcryoSPARCv3.3.2+220824

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesF32GM142149
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United States1R01GM138854
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United States1R01GM141100

Revision History  (Full details and data files)

  • Version 1.0: 2023-04-19
    Type: Initial release
  • Version 1.1: 2023-04-26
    Changes: Database references
  • Version 1.2: 2024-06-19
    Changes: Data collection
  • Version 1.3: 2025-05-28
    Changes: Data collection, Structure summary