8E22

VPS37A_21-148

  • Classification: STRUCTURAL PROTEIN
  • Organism(s): Homo sapiens
  • Expression System: Escherichia coli
  • Mutation(s): No 

  • Deposited: 2022-08-12 Released: 2023-08-09 
  • Deposition Author(s): Tian, F., Ye, Y.S.
  • Funding Organization(s): National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)

Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 50 
  • Conformers Submitted: 10 
  • Selection Criteria: structures with the lowest energy 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Identification of membrane curvature sensing motifs essential for VPS37A phagophore recruitment and autophagosome closure.

Ye, Y.Liang, X.Wang, G.Bewley, M.C.Hamamoto, K.Liu, X.Flanagan, J.M.Wang, H.G.Takahashi, Y.Tian, F.

(2024) Commun Biol 7: 334-334

  • DOI: https://doi.org/10.1038/s42003-024-06026-7
  • Primary Citation of Related Structures:  
    8E22

  • PubMed Abstract: 

    VPS37A, an ESCRT-I complex component, is required for recruiting a subset of ESCRT proteins to the phagophore for autophagosome closure. However, the mechanism by which VPS37A is targeted to the phagophore remains obscure. Here, we demonstrate that the VPS37A N-terminal domain exhibits selective interactions with highly curved membranes, mediated by two membrane-interacting motifs within the disordered regions surrounding its Ubiquitin E2 variant-like (UEVL) domain. Site-directed mutations of residues in these motifs disrupt ESCRT-I localization to the phagophore and result in defective phagophore closure and compromised autophagic flux in vivo, highlighting their essential role during autophagy. In conjunction with the UEVL domain, we postulate that these motifs guide a functional assembly of the ESCRT machinery at the highly curved tip of the phagophore for autophagosome closure. These results advance the notion that the distinctive membrane architecture of the cup-shaped phagophore spatially regulates autophagosome biogenesis.


  • Organizational Affiliation

    Department of Biochemistry and Molecular Biology, The Pennsylvania State University, Hershey, PA, 17033, USA. yanshengye@pennstatehealth.psu.edu.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Vacuolar protein sorting-associated protein 37AA [auth X]128Homo sapiensMutation(s): 0 
Gene Names: VPS37AHCRP1
UniProt & NIH Common Fund Data Resources
Find proteins for Q8NEZ2 (Homo sapiens)
Explore Q8NEZ2 
Go to UniProtKB:  Q8NEZ2
PHAROS:  Q8NEZ2
GTEx:  ENSG00000155975 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ8NEZ2
Sequence Annotations
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 50 
  • Conformers Submitted: 10 
  • Selection Criteria: structures with the lowest energy 

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesGM127730

Revision History  (Full details and data files)

  • Version 1.0: 2023-08-09
    Type: Initial release
  • Version 1.1: 2024-04-03
    Changes: Data collection, Database references
  • Version 1.2: 2024-05-01
    Changes: Database references