Download MendeleyStructural study of the Cobetia marina bacteriophage 1 (Carin-1) by Cryo-EM
d'Acapito, A., Roret, T., Zarkadas, E., Mocaer, P.Y., Lelchat, F., Baudoux, A.C., Schoehn, G., Neumann, E.To be published.
8CK1
Carin 1 bacteriophage tail, connector and tail fibers assembly
- PDB DOI: 10.2210/pdb8CK1/pdb
- EM Map EMD-16689: EMDB EMDataResource
- Classification: VIRUS
- Organism(s): Ribes
- Mutation(s): No
- Deposited: 2023-02-14 Released: 2023-03-15
- Funding Organization(s): Centre National de la Recherche Scientifique (CNRS)
Experimental Data Snapshot
- Method: ELECTRON MICROSCOPY
- Resolution: 3.90 Å
- Aggregation State: PARTICLE
- Reconstruction Method: SINGLE PARTICLE
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Tail Nozzle | A | 830 | Ribes | Mutation(s): 0 |  |
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Protein Feature ViewExpand | |||||
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Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Tail fibers Dpo36 | C [auth B], D [auth C], B [auth D] | 828 | Ribes | Mutation(s): 0 |  |
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Protein Feature ViewExpand | |||||
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Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 3 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Connector Protein | E, F | 222 | Ribes | Mutation(s): 0 |  |
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Protein Feature ViewExpand | |||||
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Experimental Data & Validation
Experimental Data
- Method: ELECTRON MICROSCOPY
- Resolution: 3.90 Å
- Aggregation State: PARTICLE
- Reconstruction Method: SINGLE PARTICLE
| Task | Software Package | Version |
|---|---|---|
| RECONSTRUCTION | RELION | 3.1 |
Entry History & Funding Information
Deposition Data
- Released Date: 2023-03-15 Deposition Author(s): d'Acapito, A., Neumann, E., Schoehn, G.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Centre National de la Recherche Scientifique (CNRS) | France | -- |
Revision History (Full details and data files)
- Version 1.0: 2023-03-15
Type: Initial release
