8C0B

CryoEM structure of Aspergillus nidulans UTP-glucose-1-phosphate uridylyltransferase

PDB DOI: https://doi.org/10.2210/pdb8C0B/pdb
EM Map EMD-16357: EMDB EMDataResource

Classification: SUGAR BINDING PROTEIN
Organism(s): Aspergillus nidulans FGSC A4
Mutation(s): No

Deposited: 2022-12-16 Released: 2023-06-28
Deposition Author(s): Han, X., D Angelo, C., Otamendi, A., Cifuente, J.O., de Astigarraga, E., Ochoa-Lizarralde, B., Grininger, M., Routier, F.H., Guerin, M.E., Fuehring, J., Etxebeste, O., Connell, S.R.
Funding Organization(s): Ministry of Economy and Competitiveness (MINECO)

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.98 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

Molecular mechanism of UDP-Glc biosynthesis by the essential UDP-Glc pyrophosphorylase from Aspergillus nidulans

Han, X., D Angelo, C., Otamendi, A., Cifuente, J.O., de Astigarraga, E., Ochoa-Lizarralde, B., Grininger, M., Routier, F.H., Guerin, M.E., Fuehring, J., Etxebeste, O., Connell, S.R.

To be published.

Macromolecule Content

Total Structure Weight: 461.08 kDa
Atom Count: 29,816
Modelled Residue Count: 3,768
Deposited Residue Count: 4,112
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
UTP--glucose-1-phosphate uridylyltransferase	A, B, C, D, E A, B, C, D, E, F, G, H	514	Aspergillus nidulans FGSC A4	Mutation(s): 0 EC: 2.7.7.9
UniProt
Find proteins for C8VK50 (Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)) Explore C8VK50 Go to UniProtKB: C8VK50
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	C8VK50
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 3.98 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2023-06-28

Deposition Author(s):

de Astigarraga, E.

Ochoa-Lizarralde, B.

Funding Organization	Location	Grant Number
Ministry of Economy and Competitiveness (MINECO)	Spain	PID2021-122705OB-I00

Revision History (Full details and data files)

Version 1.0: 2023-06-28
Type: Initial release

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.