8BSO

Experimental Data Snapshot

wwPDB Validation 3D Report Full Report

Ligand Structure Quality Assessment

This is version 1.0 of the entry. See complete history.

Literature

Macromolecule Content

Macromolecules

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(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
BAR-1 Fab heavy chain	A [auth H], C	227	Mus musculus	Mutation(s): 0
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
Sequence Annotations Expand
Reference Sequence

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(by identity cutoff) | 3D Structure

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
BAR-1 Fab light chain	B [auth L], D	219	Mus musculus	Mutation(s): 0
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
Sequence Annotations Expand
Reference Sequence

Oligosaccharides

Entity ID: 3
Molecule	Chains	Length	2D Diagram	Glycosylation	3D Interactions
N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose	E [auth G], F [auth I]	3		N/A	Interactions Focus chain E [auth G] Focus chain F [auth I] Interactions & Density Focus chain E [auth G] Focus chain F [auth I]
Glycosylation Resources
GlyTouCan: G91237TK GlyCosmos: G91237TK GlyGen: G91237TK

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
SL9 (Subject of Investigation/LOI) Query on SL9 Download Ideal Coordinates CCD File SDF format, chain J [auth L] SDF format, chain L [auth D] MOL2 format, chain J [auth L] MOL2 format, chain L [auth D]	J [auth L], L [auth D]	(2~{S})-2-acetamido-6-(2-sulfanylethanimidoylamino)hexanamide C₁₀ H₂₀ N₄ O₂ S VZQPDVWZAWZPHB-QMMMGPOBSA-N		Interactions Focus chain J [auth L] Focus chain L [auth D] Interactions & Density Focus chain J [auth L] Focus chain L [auth D]
GOL Query on GOL Download Ideal Coordinates CCD File SDF format, chain G [auth H] SDF format, chain H SDF format, chain I [auth L] SDF format, chain K [auth C] MOL2 format, chain G [auth H] MOL2 format, chain H MOL2 format, chain I [auth L] MOL2 format, chain K [auth C]	G [auth H], H, I [auth L], K [auth C]	GLYCEROL C₃ H₈ O₃ PEDCQBHIVMGVHV-UHFFFAOYSA-N		Interactions Focus chain G [auth H] Focus chain H Focus chain I [auth L] Focus chain K [auth C] Interactions & Density Focus chain G [auth H] Focus chain H Focus chain I [auth L] Focus chain K [auth C]

Biologically Interesting Molecules (External Reference) 1 Unique

Entity ID: 3
ID	Chains	Name	Type/Class	2D Diagram	3D Interactions
PRD_002443 Query on PRD_002443	E [auth G], F [auth I]	SiaLac-amidine-Lys	Oligosaccharide /		Interactions Focus chain E [auth G] Focus chain F [auth I] Interactions & Density Focus chain E [auth G] Focus chain F [auth I]