8BOO | pdb_00008boo

Spatials structure of amyloidogenic SEM1(45-67) peptide

PDB DOI: https://doi.org/10.2210/pdb8BOO/pdb
BMRB: 51673

Classification: STRUCTURAL PROTEIN
Organism(s): Homo sapiens
Mutation(s): No

Deposited: 2022-11-15 Released: 2023-01-18
Deposition Author(s): Blokhin, D.S., Osetrina, D.A.
Funding Organization(s): Russian Science Foundation

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 1000
Conformers Submitted: 11
Selection Criteria: structures with the least restraint violations

wwPDB Validation 3D Report Full Report

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This is version 1.1 of the entry. See complete history.

Literature

Spatials structure of amyloidogenic SEM1(45-67) peptide

Blokhin, D.S., Osetrina, D.A.

To be published.

Macromolecule Content

Total Structure Weight: 2.58 kDa
Atom Count: 182
Modeled Residue Count: 23
Deposited Residue Count: 23
Unique protein chains: 1

Macromolecules

Find similar proteins by: Sequence | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Semenogelin-1	A	23	Homo sapiens	Mutation(s): 0
UniProt & NIH Common Fund Data Resources
Find proteins for P04279 (Homo sapiens) Explore P04279 Go to UniProtKB: P04279
PHAROS: P04279 GTEx: ENSG00000124233
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P04279
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 1000
Conformers Submitted: 11
Selection Criteria: structures with the least restraint violations

Structure Validation

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View more in-depth experimental data

Entry History

& Funding Information

Deposition Data

Released Date: 2023-01-18

Deposition Author(s):

Funding Organization	Location	Grant Number
Russian Science Foundation	Russian Federation	20-73-10034

Revision History (Full details and data files)

Version 1.0: 2023-01-18
Type: Initial release
Version 1.1: 2024-01-31
Changes: Data collection

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.