8BGF

NMR solution structure of the N-terminal RRM and flanking linker regions of Polypyrimidine tract binding protein 1 using the CYANA CONSENSUS method.

• PDB DOI: https://doi.org/10.2210/pdb8BGF/pdb
• BMRB: 34766

• Classification: RNA BINDING PROTEIN
• Organism(s): Homo sapiens
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): No 


• Deposited: 2022-10-27 Released: 2023-11-08 
• Deposition Author(s): Damberger, F.D., Beusch, I., Allain, F.H.-T.
• Funding Organization(s): Swiss National Science Foundation, Council of Scientific & Industrial Research (CSIR), Czech Science Foundation

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 2000 
• Conformers Submitted: 20 
• Selection Criteria: structures with the least restraint violations 

Literature

N-terminal domain of Polypyrimidine-tract binding protein is a dynamic folding platform for adaptive RNA recognition

Damberger, F., Krepl, M., Beusch, I., Dorn, G., Maris, C., Sponer, J., Ravindranathan, S., Allain, F.H.-T.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Biological Assembly Evidence: NMR Distance Restraints

Macromolecule Content

• Total Structure Weight: 13.38 kDa 
• Atom Count: 938 
• Modelled Residue Count: 123 
• Deposited Residue Count: 123 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Polypyrimidine tract-binding protein 1	A	123	Homo sapiens	Mutation(s): 0  Gene Names: PTBP1, PTB
UniProt & NIH Common Fund Data Resources
Find proteins for P26599 (Homo sapiens) Explore P26599  Go to UniProtKB:  P26599
PHAROS:  P26599 GTEx:  ENSG00000011304

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 2000 
• Conformers Submitted: 20 
• Selection Criteria: structures with the least restraint violations 

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2023-11-08 
Deposition Author(s): Damberger, F.D., Beusch, I., Allain, F.H.-T.

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Funding Organization	Location	Grant Number
Swiss National Science Foundation	Switzerland	133134
Council of Scientific & Industrial Research (CSIR)	India	CSC0405
Czech Science Foundation	Czech Republic	20-16554S

Revision History  

• Version 1.0: 2023-11-08
  Type: Initial release