Download MendeleyCrystal structure of a chimeric LOV-Histidine kinase SB2F1-I66R mutant (light state; asymmetrical variant, trigonal form with long c axis)
Arinkin, V., Granzin, J., Batra-Safferling, R., Krauss, U.To be published.
8A7H
Crystal structure of a chimeric LOV-Histidine kinase SB2F1-I66R mutant (light state; asymmetrical variant, trigonal form with long c axis)
- PDB DOI: https://doi.org/10.2210/pdb8A7H/pdb
- Classification: SIGNALING PROTEIN
- Organism(s): Pseudomonas putida KT2440, Bradyrhizobium diazoefficiens USDA 110
- Expression System: Escherichia coli 'BL21-Gold(DE3)pLysS AG
- Mutation(s): Yes
- Deposited: 2022-06-21 Released: 2024-01-10
- Funding Organization(s): German Federal Ministry for Education and Research
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 3.15 Å
- R-Value Free: 0.306
- R-Value Work: 0.253
- R-Value Observed: 0.257
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Putative Sensory box protein,Sensor protein FixL | 388 | Pseudomonas putida KT2440, Bradyrhizobium diazoefficiens USDA 110 This entity is chimeric | Mutation(s): 1 Gene Names: PP_2739, fixL, bll2760 EC: 2.7.13.3 |  | |
UniProt | |||||
Find proteins for P23222 (Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110)) Explore P23222 Go to UniProtKB: P23222 | |||||
Find proteins for Q88JB0 (Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)) Explore Q88JB0 Go to UniProtKB: Q88JB0 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Groups | P23222Q88JB0 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| ATP (Subject of Investigation/LOI) Query on ATP | C [auth A], E [auth B] | ADENOSINE-5'-TRIPHOSPHATE C10 H16 N5 O13 P3 ZKHQWZAMYRWXGA-KQYNXXCUSA-N |  | ||
| JGC (Subject of Investigation/LOI) Query on JGC | D [auth A], F [auth B] | Flavin mononucleotide (semi-quinone intermediate) C17 H23 N4 O9 P JNFNEOXSUODPSY-DGAVXFQQSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 3.15 Å
- R-Value Free: 0.306
- R-Value Work: 0.253
- R-Value Observed: 0.257
- Space Group: P 31 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 139.42 | α = 90 |
| b = 139.42 | β = 90 |
| c = 89.881 | γ = 120 |
| Software Name | Purpose |
|---|---|
| MxCuBE | data collection |
| PHENIX | refinement |
| XDS | data reduction |
| Aimless | data scaling |
| MOLREP | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2024-01-10 Deposition Author(s): Arinkin, V., Granzin, J., Batra-Safferling, R.
| Funding Organization | Location | Grant Number |
|---|---|---|
| German Federal Ministry for Education and Research | Germany | FKZ 031A16 |
Revision History (Full details and data files)
- Version 1.0: 2024-01-10
Type: Initial release
