7Z8Y

Crystal structure of the SUN1-KASH6 9:6 complex


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.29 Å
  • R-Value Free: 0.218 
  • R-Value Work: 0.185 
  • R-Value Observed: 0.186 

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This is version 1.1 of the entry. See complete history


Literature

The crystal structure of SUN1-KASH6 reveals an asymmetric LINC complex architecture compatible with nuclear membrane insertion.

Gurusaran, M.Erlandsen, B.S.Davies, O.R.

(2024) Commun Biol 7: 138-138

  • DOI: https://doi.org/10.1038/s42003-024-05794-6
  • Primary Citation of Related Structures:  
    7Z8Y, 8B46, 8B5X

  • PubMed Abstract: 

    The LINC complex transmits cytoskeletal forces into the nucleus to control the structure and movement of nuclear contents. It is formed of nuclear SUN and cytoplasmic KASH proteins, which interact within the nuclear lumen, immediately below the outer nuclear membrane. However, the symmetrical location of KASH molecules within SUN-KASH complexes in previous crystal structures has been difficult to reconcile with the steric requirements for insertion of their immediately upstream transmembrane helices into the outer nuclear membrane. Here, we report the crystal structure of the SUN-KASH complex between SUN1 and JAW1/LRMP (KASH6) in an asymmetric 9:6 configuration. This intertwined assembly involves two distinct KASH conformations such that all six KASH molecules emerge on the same molecular surface. Hence, they are ideally positioned for insertion of upstream sequences into the outer nuclear membrane. Thus, we report a SUN-KASH complex architecture that appears to be directly compatible with its biological role.


  • Organizational Affiliation

    Wellcome Centre for Cell Biology, Institute of Cell Biology, University of Edinburgh, Michael Swann Building, Max Born Crescent, Edinburgh, EH9 3BF, UK.


Macromolecules
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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
SUN domain-containing protein 1
A, B, C
203Homo sapiensMutation(s): 0 
Gene Names: SUN1KIAA0810UNC84A
UniProt & NIH Common Fund Data Resources
Find proteins for O94901 (Homo sapiens)
Explore O94901 
Go to UniProtKB:  O94901
PHAROS:  O94901
GTEx:  ENSG00000164828 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupO94901
Sequence Annotations
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  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Inositol 1,4,5-triphosphate receptor associated 2
D, E
28Homo sapiensMutation(s): 0 
Gene Names: IRAG2JAW1LRMP
UniProt & NIH Common Fund Data Resources
Find proteins for Q12912 (Homo sapiens)
Explore Q12912 
Go to UniProtKB:  Q12912
PHAROS:  Q12912
GTEx:  ENSG00000118308 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ12912
Sequence Annotations
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.29 Å
  • R-Value Free: 0.218 
  • R-Value Work: 0.185 
  • R-Value Observed: 0.186 
  • Space Group: P 63
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 133.762α = 90
b = 133.762β = 90
c = 106.711γ = 120
Software Package:
Software NamePurpose
PHENIXmodel building
PHENIXrefinement
autoPROCdata processing
XDSdata reduction
STARANISOdata scaling
PHASERphasing

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Wellcome TrustUnited Kingdom219413/Z/19/Z

Revision History  (Full details and data files)

  • Version 1.0: 2023-09-27
    Type: Initial release
  • Version 1.1: 2024-02-14
    Changes: Database references