7Z3O

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.30 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

Structural inventory of cotranslational protein folding by the eukaryotic RAC complex.

Kisonaite, M.Wild, K.Lapouge, K.Gese, G.V.Kellner, N.Hurt, E.Sinning, I.

(2023) Nat Struct Mol Biol 30: 670-677

  • DOI: https://doi.org/10.1038/s41594-023-00973-1
  • Primary Citation of Related Structures:  
    7Z3N, 7Z3O

  • PubMed Abstract: 

    The challenge of nascent chain folding at the ribosome is met by the conserved ribosome-associated complex (RAC), which forms a chaperone triad with the Hsp70 protein Ssb in fungi, and consists of the non-canonical Hsp70 Ssz1 and the J domain protein Zuotin (Zuo1). Here we determine cryo-EM structures of Chaetomium thermophilum RAC bound to 80S ribosomes. RAC adopts two distinct conformations accommodating continuous ribosomal rotation by a flexible lever arm. It is held together by a tight interaction between the Ssz1 substrate-binding domain and the Zuo1 N terminus, and additional contacts between the Ssz1 nucleotide-binding domain and Zuo1 J- and Zuo1 homology domains, which form a rigid unit. The Zuo1 HPD motif conserved in J-proteins is masked in a non-canonical interaction by the Ssz1 nucleotide-binding domain, and allows the positioning of Ssb for activation by Zuo1. Overall, we provide the basis for understanding how RAC cooperates with Ssb in a dynamic nascent chain interaction and protein folding.


  • Organizational Affiliation

    Heidelberg University Biochemistry Center (BZH), Heidelberg, Germany.


Macromolecules

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Entity ID: 5
MoleculeChains Sequence LengthOrganismDetailsImage
Putative guanine nucleotide-binding proteinE [auth A]316Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 6
MoleculeChains Sequence LengthOrganismDetailsImage
HABP4_PAI-RBP1 domain-containing proteinF [auth B]302Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
Find proteins for G0S428 (Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
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Entity ID: 7
MoleculeChains Sequence LengthOrganismDetailsImage
Putative ribosome associated proteinG [auth C]446Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 8
MoleculeChains Sequence LengthOrganismDetailsImage
Putative heat shock proteinH [auth D]578Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 9
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L2-like proteinI [auth LA]254Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
Find proteins for G0S4P8 (Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
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Entity ID: 10
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L3-like proteinJ [auth LB]392Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 11
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L4-like proteinK [auth LC]365Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 12
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein l5-like proteinL [auth LD]304Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 13
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L6M [auth LE]200Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 14
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein l7-like proteinN [auth LF]249Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
Find proteins for G0SFL0 (Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
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Entity ID: 15
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L8O [auth LG]262Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 16
MoleculeChains Sequence LengthOrganismDetailsImage
uL6P [auth LH]192Thermochaetoides thermophila DSM 1495Mutation(s): 0 
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Entity ID: 17
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L10-like proteinQ [auth LI]219Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 18
MoleculeChains Sequence LengthOrganismDetailsImage
Putative ribosomal proteinR [auth LJ]173Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 19
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L12-like proteinS [auth LK]165Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 20
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L13T [auth LL]213Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
Find proteins for G0S992 (Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
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Entity ID: 21
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L14-like proteinU [auth LM]142Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
Find proteins for G0S1R0 (Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
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Entity ID: 22
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal protein L15V [auth LN]203Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
Find proteins for G0RZ88 (Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
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Entity ID: 23
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L16-like proteinW [auth LO]204Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
Find proteins for G0SH61 (Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
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Entity ID: 24
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein l17-like proteinX [auth LP]187Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
Find proteins for G0SGY1 (Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
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Entity ID: 25
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal protein L18-like proteinY [auth LQ]213Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
Find proteins for G0S9B5 (Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
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Entity ID: 26
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal protein L19Z [auth LR]192Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
Find proteins for G0S9T3 (Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
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Entity ID: 27
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L20AA [auth LS]174Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 28
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein l21-like proteinBA [auth LT]160Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 29
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L22-like proteinCA [auth LU]127Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 30
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein l23-like proteinDA [auth LV]139Thermochaetoides thermophila DSM 1495Mutation(s): 0 
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Entity ID: 31
MoleculeChains Sequence LengthOrganismDetailsImage
eL24EA [auth LW]161Thermochaetoides thermophila DSM 1495Mutation(s): 0 
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Entity ID: 32
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L25-like proteinFA [auth LX]156Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 33
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L26-like proteinGA [auth LY]138Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 34
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L27HA [auth LZ]135Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 35
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L28-like proteinIA [auth La]149Thermochaetoides thermophila DSM 1495Mutation(s): 0 
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Entity ID: 36
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L29JA [auth Lb]65Thermochaetoides thermophila DSM 1495Mutation(s): 0 
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Entity ID: 37
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein l30-like proteinKA [auth Lc]108Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 38
MoleculeChains Sequence LengthOrganismDetailsImage
Putative 60S ribosomal proteinLA [auth Ld]120Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 39
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L32-like proteinMA [auth Le]131Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
Find proteins for G0S6V4 (Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
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Entity ID: 40
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein l33-like proteinNA [auth Lf]109Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
Find proteins for G0SCL3 (Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
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Entity ID: 41
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal protein l34-like proteinOA [auth Lg]119Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 42
MoleculeChains Sequence LengthOrganismDetailsImage
Dolichyl-diphosphooligosaccharide--protein glycotransferasePA [auth Lh]126Thermochaetoides thermophila DSM 1495Mutation(s): 0 
EC: 2.4.99.18
UniProt
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Entity ID: 43
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L36QA [auth Li]110Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 44
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal protein L37RA [auth Lj]95Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 45
MoleculeChains Sequence LengthOrganismDetailsImage
eL38SA [auth Lk]81Thermochaetoides thermophila DSM 1495Mutation(s): 0 
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Entity ID: 46
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal protein eL39TA [auth Ll]51Thermochaetoides thermophila DSM 1495Mutation(s): 0 
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Entity ID: 47
MoleculeChains Sequence LengthOrganismDetailsImage
Putative ribosomal proteinUA [auth Lm]128Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 48
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L41-AVA [auth Ln],
ZA [auth Lr]
25Thermochaetoides thermophila DSM 1495Mutation(s): 0 
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Entity ID: 49
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L44-like proteinWA [auth Lo]106Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 50
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L43-like proteinXA [auth Lp]92Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
Find proteins for G0S6B0 (Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
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Entity ID: 51
MoleculeChains Sequence LengthOrganismDetailsImage
Putative 60S ribosomal proteinYA [auth Lq]147Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 52
MoleculeChains Sequence LengthOrganismDetailsImage
60S acidic ribosomal protein P0AB [auth Ls]312Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 53
MoleculeChains Sequence LengthOrganismDetailsImage
Nascent chainBB [auth NC]27Thermochaetoides thermophila DSM 1495Mutation(s): 0 
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Entity ID: 54
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S0CB [auth SA]285Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 55
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S1DB [auth SB]255Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 56
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S2-like proteinEB [auth SC]263Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 57
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S3-like proteinFB [auth SD]254Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 58
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S4GB [auth SE]264Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 59
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein s5-like proteinHB [auth SF]212Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 60
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S6IB [auth SG]239Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 61
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S7JB [auth SH]203Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 62
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S8KB [auth SI]202Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 63
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein s9-like proteinLB [auth SJ]190Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 64
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein s10-like proteinMB [auth SK]159Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 65
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S11-like proteinNB [auth SL]161Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 66
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S12OB [auth SM]144Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 67
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S13-like proteinPB [auth SN]151Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 68
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S14-like proteinQB [auth SO]150Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
Find proteins for G0SFL1 (Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
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Entity ID: 69
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein s15-like proteinRB [auth SP]153Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 70
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S16-like proteinSB [auth SQ]143Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 71
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S17-like proteinTB [auth SR]143Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 72
MoleculeChains Sequence LengthOrganismDetailsImage
Putative ribosomal proteinUB [auth SS]156Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 73
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S19-like proteinVB [auth ST]153Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 74
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S20-like proteinWB [auth SU]116Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 75
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S21-like proteinXB [auth SV]98Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 76
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S22-like proteinYB [auth SW]130Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 77
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein s23-like proteinZB [auth SX]145Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 78
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S24AC [auth SY]136Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 79
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S25BC [auth SZ]99Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 80
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S26CC [auth Sa]119Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 81
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal protein s27-like proteinDC [auth Sb]82Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 82
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S28-like proteinEC [auth Sc]68Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 83
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal protein uS14FC [auth Sd]56Thermochaetoides thermophila DSM 1495Mutation(s): 0 
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Entity ID: 84
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S30GC [auth Se]62Thermochaetoides thermophila DSM 1495Mutation(s): 0 
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Entity ID: 85
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S27a-like proteinHC [auth Sf]154Thermochaetoides thermophila DSM 1495Mutation(s): 0 
UniProt
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Entity ID: 1
MoleculeChains LengthOrganismImage
26S rRNAA [auth 1]3,337Thermochaetoides thermophila DSM 1495
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Entity ID: 2
MoleculeChains LengthOrganismImage
18S rRNAB [auth 2]1,796Thermochaetoides thermophila DSM 1495
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Entity ID: 3
MoleculeChains LengthOrganismImage
5S rRNAC [auth 3]120Thermochaetoides thermophila DSM 1495
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Entity ID: 4
MoleculeChains LengthOrganismImage
5.8S rRNAD [auth 4]156Thermochaetoides thermophila DSM 1495
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Small Molecules
Ligands 3 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
ATP
Query on ATP

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CU [auth D]ADENOSINE-5'-TRIPHOSPHATE
C10 H16 N5 O13 P3
ZKHQWZAMYRWXGA-KQYNXXCUSA-N
ZN
Query on ZN

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MU [auth Lg]
NU [auth Lj]
OU [auth Lm]
PU [auth Lo]
RU [auth Lp]
MU [auth Lg],
NU [auth Lj],
OU [auth Lm],
PU [auth Lo],
RU [auth Lp],
SU [auth Sa],
TU [auth Sb],
UU [auth Sd]
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
MG
Query on MG

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AD [auth 1]
AE [auth 1]
AF [auth 1]
AG [auth 1]
AH [auth 1]
AD [auth 1],
AE [auth 1],
AF [auth 1],
AG [auth 1],
AH [auth 1],
AI [auth 1],
AJ [auth 1],
AK [auth 1],
AL [auth 1],
AM [auth 1],
AN [auth 1],
AO [auth 1],
AP [auth 1],
AQ [auth 1],
AR [auth 2],
AS [auth 2],
AT [auth 2],
AU [auth 4],
BD [auth 1],
BE [auth 1],
BF [auth 1],
BG [auth 1],
BH [auth 1],
BI [auth 1],
BJ [auth 1],
BK [auth 1],
BL [auth 1],
BM [auth 1],
BN [auth 1],
BO [auth 1],
BP [auth 1],
BQ [auth 1],
BR [auth 2],
BS [auth 2],
BT [auth 2],
BU [auth 4],
CD [auth 1],
CE [auth 1],
CF [auth 1],
CG [auth 1],
CH [auth 1],
CI [auth 1],
CJ [auth 1],
CK [auth 1],
CL [auth 1],
CM [auth 1],
CN [auth 1],
CO [auth 1],
CP [auth 1],
CQ [auth 1],
CR [auth 2],
CS [auth 2],
CT [auth 2],
DD [auth 1],
DE [auth 1],
DF [auth 1],
DG [auth 1],
DH [auth 1],
DI [auth 1],
DJ [auth 1],
DK [auth 1],
DL [auth 1],
DM [auth 1],
DN [auth 1],
DO [auth 1],
DP [auth 1],
DQ [auth 1],
DR [auth 2],
DS [auth 2],
DT [auth 2],
DU [auth D],
ED [auth 1],
EE [auth 1],
EF [auth 1],
EG [auth 1],
EH [auth 1],
EI [auth 1],
EJ [auth 1],
EK [auth 1],
EL [auth 1],
EM [auth 1],
EN [auth 1],
EO [auth 1],
EP [auth 1],
EQ [auth 1],
ER [auth 2],
ES [auth 2],
ET [auth 2],
EU [auth LC],
FD [auth 1],
FE [auth 1],
FF [auth 1],
FG [auth 1],
FH [auth 1],
FI [auth 1],
FJ [auth 1],
FK [auth 1],
FL [auth 1],
FM [auth 1],
FN [auth 1],
FO [auth 1],
FP [auth 1],
FQ [auth 1],
FR [auth 2],
FS [auth 2],
FT [auth 2],
FU [auth LN],
GD [auth 1],
GE [auth 1],
GF [auth 1],
GG [auth 1],
GH [auth 1],
GI [auth 1],
GJ [auth 1],
GK [auth 1],
GL [auth 1],
GM [auth 1],
GN [auth 1],
GO [auth 1],
GP [auth 1],
GQ [auth 1],
GR [auth 2],
GS [auth 2],
GT [auth 2],
GU [auth LN],
HD [auth 1],
HE [auth 1],
HF [auth 1],
HG [auth 1],
HH [auth 1],
HI [auth 1],
HJ [auth 1],
HK [auth 1],
HL [auth 1],
HM [auth 1],
HN [auth 1],
HO [auth 1],
HP [auth 1],
HQ [auth 1],
HR [auth 2],
HS [auth 2],
HT [auth 2],
HU [auth LN],
IC [auth 1],
ID [auth 1],
IE [auth 1],
IF [auth 1],
IG [auth 1],
IH [auth 1],
II [auth 1],
IJ [auth 1],
IK [auth 1],
IL [auth 1],
IM [auth 1],
IN [auth 1],
IO [auth 1],
IP [auth 1],
IQ [auth 1],
IR [auth 2],
IS [auth 2],
IT [auth 2],
IU [auth LP],
JC [auth 1],
JD [auth 1],
JE [auth 1],
JF [auth 1],
JG [auth 1],
JH [auth 1],
JI [auth 1],
JJ [auth 1],
JK [auth 1],
JL [auth 1],
JM [auth 1],
JN [auth 1],
JO [auth 1],
JP [auth 1],
JQ [auth 1],
JR [auth 2],
JS [auth 2],
JT [auth 2],
JU [auth LV],
KC [auth 1],
KD [auth 1],
KE [auth 1],
KF [auth 1],
KG [auth 1],
KH [auth 1],
KI [auth 1],
KJ [auth 1],
KK [auth 1],
KL [auth 1],
KM [auth 1],
KN [auth 1],
KO [auth 1],
KP [auth 1],
KQ [auth 2],
KR [auth 2],
KS [auth 2],
KT [auth 2],
KU [auth LW],
LC [auth 1],
LD [auth 1],
LE [auth 1],
LF [auth 1],
LG [auth 1],
LH [auth 1],
LI [auth 1],
LJ [auth 1],
LK [auth 1],
LL [auth 1],
LM [auth 1],
LN [auth 1],
LO [auth 1],
LP [auth 1],
LQ [auth 2],
LR [auth 2],
LS [auth 2],
LT [auth 2],
LU [auth Lb],
MC [auth 1],
MD [auth 1],
ME [auth 1],
MF [auth 1],
MG [auth 1],
MH [auth 1],
MI [auth 1],
MJ [auth 1],
MK [auth 1],
ML [auth 1],
MM [auth 1],
MN [auth 1],
MO [auth 1],
MP [auth 1],
MQ [auth 2],
MR [auth 2],
MS [auth 2],
MT [auth 3],
NC [auth 1],
ND [auth 1],
NE [auth 1],
NF [auth 1],
NG [auth 1],
NH [auth 1],
NI [auth 1],
NJ [auth 1],
NK [auth 1],
NL [auth 1],
NM [auth 1],
NN [auth 1],
NO [auth 1],
NP [auth 1],
NQ [auth 2],
NR [auth 2],
NS [auth 2],
NT [auth 3],
OC [auth 1],
OD [auth 1],
OE [auth 1],
OF [auth 1],
OG [auth 1],
OH [auth 1],
OI [auth 1],
OJ [auth 1],
OK [auth 1],
OL [auth 1],
OM [auth 1],
ON [auth 1],
OO [auth 1],
OP [auth 1],
OQ [auth 2],
OR [auth 2],
OS [auth 2],
OT [auth 3],
PC [auth 1],
PD [auth 1],
PE [auth 1],
PF [auth 1],
PG [auth 1],
PH [auth 1],
PI [auth 1],
PJ [auth 1],
PK [auth 1],
PL [auth 1],
PM [auth 1],
PN [auth 1],
PO [auth 1],
PP [auth 1],
PQ [auth 2],
PR [auth 2],
PS [auth 2],
PT [auth 3],
QC [auth 1],
QD [auth 1],
QE [auth 1],
QF [auth 1],
QG [auth 1],
QH [auth 1],
QI [auth 1],
QJ [auth 1],
QK [auth 1],
QL [auth 1],
QM [auth 1],
QN [auth 1],
QO [auth 1],
QP [auth 1],
QQ [auth 2],
QR [auth 2],
QS [auth 2],
QT [auth 3],
QU [auth Lo],
RC [auth 1],
RD [auth 1],
RE [auth 1],
RF [auth 1],
RG [auth 1],
RH [auth 1],
RI [auth 1],
RJ [auth 1],
RK [auth 1],
RL [auth 1],
RM [auth 1],
RN [auth 1],
RO [auth 1],
RP [auth 1],
RQ [auth 2],
RR [auth 2],
RS [auth 2],
RT [auth 3],
SC [auth 1],
SD [auth 1],
SE [auth 1],
SF [auth 1],
SG [auth 1],
SH [auth 1],
SI [auth 1],
SJ [auth 1],
SK [auth 1],
SL [auth 1],
SM [auth 1],
SN [auth 1],
SO [auth 1],
SP [auth 1],
SQ [auth 2],
SR [auth 2],
SS [auth 2],
ST [auth 3],
TC [auth 1],
TD [auth 1],
TE [auth 1],
TF [auth 1],
TG [auth 1],
TH [auth 1],
TI [auth 1],
TJ [auth 1],
TK [auth 1],
TL [auth 1],
TM [auth 1],
TN [auth 1],
TO [auth 1],
TP [auth 1],
TQ [auth 2],
TR [auth 2],
TS [auth 2],
TT [auth 4],
UC [auth 1],
UD [auth 1],
UE [auth 1],
UF [auth 1],
UG [auth 1],
UH [auth 1],
UI [auth 1],
UJ [auth 1],
UK [auth 1],
UL [auth 1],
UM [auth 1],
UN [auth 1],
UO [auth 1],
UP [auth 1],
UQ [auth 2],
UR [auth 2],
US [auth 2],
UT [auth 4],
VC [auth 1],
VD [auth 1],
VE [auth 1],
VF [auth 1],
VG [auth 1],
VH [auth 1],
VI [auth 1],
VJ [auth 1],
VK [auth 1],
VL [auth 1],
VM [auth 1],
VN [auth 1],
VO [auth 1],
VP [auth 1],
VQ [auth 2],
VR [auth 2],
VS [auth 2],
VT [auth 4],
WC [auth 1],
WD [auth 1],
WE [auth 1],
WF [auth 1],
WG [auth 1],
WH [auth 1],
WI [auth 1],
WJ [auth 1],
WK [auth 1],
WL [auth 1],
WM [auth 1],
WN [auth 1],
WO [auth 1],
WP [auth 1],
WQ [auth 2],
WR [auth 2],
WS [auth 2],
WT [auth 4],
XC [auth 1],
XD [auth 1],
XE [auth 1],
XF [auth 1],
XG [auth 1],
XH [auth 1],
XI [auth 1],
XJ [auth 1],
XK [auth 1],
XL [auth 1],
XM [auth 1],
XN [auth 1],
XO [auth 1],
XP [auth 1],
XQ [auth 2],
XR [auth 2],
XS [auth 2],
XT [auth 4],
YC [auth 1],
YD [auth 1],
YE [auth 1],
YF [auth 1],
YG [auth 1],
YH [auth 1],
YI [auth 1],
YJ [auth 1],
YK [auth 1],
YL [auth 1],
YM [auth 1],
YN [auth 1],
YO [auth 1],
YP [auth 1],
YQ [auth 2],
YR [auth 2],
YS [auth 2],
YT [auth 4],
ZC [auth 1],
ZD [auth 1],
ZE [auth 1],
ZF [auth 1],
ZG [auth 1],
ZH [auth 1],
ZI [auth 1],
ZJ [auth 1],
ZK [auth 1],
ZL [auth 1],
ZM [auth 1],
ZN [auth 1],
ZO [auth 1],
ZP [auth 1],
ZQ [auth 2],
ZR [auth 2],
ZS [auth 2],
ZT [auth 4]
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Modified Residues  1 Unique
IDChains TypeFormula2D DiagramParent
SAC
Query on SAC
W [auth LO]L-PEPTIDE LINKINGC5 H9 N O4SER
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.30 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
MODEL REFINEMENTPHENIX

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
German Research Foundation (DFG)Germany--

Revision History  (Full details and data files)

  • Version 1.0: 2023-04-12
    Type: Initial release
  • Version 1.1: 2023-04-26
    Changes: Database references
  • Version 1.2: 2023-05-03
    Changes: Database references
  • Version 1.3: 2023-05-31
    Changes: Database references