7UCJ

Mammalian 80S translation initiation complex with mRNA and Harringtonine


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.10 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 2.1 of the entry. See complete history


Literature

Direct epitranscriptomic regulation of mammalian translation initiation through N4-acetylcytidine.

Arango, D.Sturgill, D.Yang, R.Kanai, T.Bauer, P.Roy, J.Wang, Z.Hosogane, M.Schiffers, S.Oberdoerffer, S.

(2022) Mol Cell 82: 2797-2814.e11

  • DOI: https://doi.org/10.1016/j.molcel.2022.05.016
  • Primary Citation of Related Structures:  
    7UCJ, 7UCK

  • PubMed Abstract: 

    mRNA function is influenced by modifications that modulate canonical nucleobase behavior. We show that a single modification mediates distinct impacts on mRNA translation in a position-dependent manner. Although cytidine acetylation (ac4C) within protein-coding sequences stimulates translation, ac4C within 5' UTRs impacts protein synthesis at the level of initiation. 5' UTR acetylation promotes initiation at upstream sequences, competitively inhibiting annotated start codons. Acetylation further directly impedes initiation at optimal AUG contexts: ac4C within AUG-flanking Kozak sequences reduced initiation in base-resolved transcriptome-wide HeLa results and in vitro utilizing substrates with site-specific ac4C incorporation. Cryo-EM of mammalian 80S initiation complexes revealed that ac4C in the -1 position adjacent to an AUG start codon disrupts an interaction between C and hypermodified t6A at nucleotide 37 of the initiator tRNA. These findings demonstrate the impact of RNA modifications on nucleobase function at a molecular level and introduce mRNA acetylation as a factor regulating translation in a location-specific manner.


  • Organizational Affiliation

    Laboratory of Receptor Biology and Gene Expression, Center for Cancer Research, National Cancer Institute, NIH, Bethesda, MD 20892, USA; Department of Pharmacology, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611, USA.


Macromolecules

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Entity ID: 7
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L8G [auth A]248Oryctolagus cuniculusMutation(s): 0 
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Find proteins for G1TT27 (Oryctolagus cuniculus)
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Entity ID: 8
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L3H [auth B]394Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1TL06 (Oryctolagus cuniculus)
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Entity ID: 9
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L4I [auth C]360Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for A0A5F9DCT1 (Oryctolagus cuniculus)
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Entity ID: 10
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal_L18_c domain-containing proteinJ [auth D]291Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 11
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L6K [auth E]250Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1SKF7 (Oryctolagus cuniculus)
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Entity ID: 12
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L7L [auth F]225Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1SV32 (Oryctolagus cuniculus)
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Entity ID: 13
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L7aM [auth G]233Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 14
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L9N [auth H]190Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1SWI6 (Oryctolagus cuniculus)
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Entity ID: 15
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal protein L10O [auth I]213Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for B7NZQ2 (Oryctolagus cuniculus)
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Entity ID: 16
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L11P [auth J]169Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1TUB8 (Oryctolagus cuniculus)
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Entity ID: 17
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L13Q [auth L]210Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1TPV0 (Oryctolagus cuniculus)
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Entity ID: 18
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L14R [auth M]138Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 19
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L15S [auth N]203Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1T0C1 (Oryctolagus cuniculus)
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Entity ID: 20
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L13aT [auth O]199Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 21
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L17U [auth P]153Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1SCJ6 (Oryctolagus cuniculus)
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Entity ID: 22
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L18V [auth Q]187Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 23
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L19W [auth R]180Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1TYL6 (Oryctolagus cuniculus)
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Entity ID: 24
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L18aX [auth S]176Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 25
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L21Y [auth T]159Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1SHQ2 (Oryctolagus cuniculus)
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Entity ID: 26
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L22Z [auth U]98Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 27
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L23AA [auth V]130Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1T6D1 (Oryctolagus cuniculus)
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Entity ID: 28
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal protein L24BA [auth W]95Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1SE28 (Oryctolagus cuniculus)
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Entity ID: 29
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L23aCA [auth X]118Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 30
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L26DA [auth Y]134Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1SQH0 (Oryctolagus cuniculus)
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Entity ID: 31
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L27EA [auth Z]135Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1TXF6 (Oryctolagus cuniculus)
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Entity ID: 32
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L27aFA [auth a]147Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1SNY0 (Oryctolagus cuniculus)
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Entity ID: 33
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L29GA [auth b]116Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1SGR6 (Oryctolagus cuniculus)
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Entity ID: 34
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L30HA [auth c]95Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1TDL2 (Oryctolagus cuniculus)
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Entity ID: 35
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L31IA [auth d]107Oryctolagus cuniculusMutation(s): 0 
UniProt
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Entity ID: 36
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L32JA [auth e]128Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1TUN8 (Oryctolagus cuniculus)
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Entity ID: 37
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L35aKA [auth f]109Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 38
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L34LA [auth g]114Oryctolagus cuniculusMutation(s): 0 
UniProt
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Entity ID: 39
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L35MA [auth h]122Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1SIT5 (Oryctolagus cuniculus)
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Entity ID: 40
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L36NA [auth i]102Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1TTQ5 (Oryctolagus cuniculus)
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Entity ID: 41
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L37OA [auth j]86Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 42
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L38PA [auth k]69Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 43
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L39QA [auth l]50Oryctolagus cuniculusMutation(s): 0 
UniProt
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Entity ID: 44
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L40RA [auth m]51Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 45
MoleculeChains Sequence LengthOrganismDetailsImage
eL41SA [auth n]25Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for A0A087WNH4 (Oryctolagus cuniculus)
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Entity ID: 46
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L36aTA [auth o]103Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1T040 (Oryctolagus cuniculus)
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Entity ID: 47
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L37aUA [auth p]91Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1SY53 (Oryctolagus cuniculus)
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Entity ID: 48
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L28VA [auth r]124Oryctolagus cuniculusMutation(s): 0 
UniProt
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Entity ID: 49
MoleculeChains Sequence LengthOrganismDetailsImage
40S_SA_C domain-containing proteinWA [auth AA]217Oryctolagus cuniculusMutation(s): 0 
UniProt
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Entity ID: 50
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S3aXA [auth BB]211Oryctolagus cuniculusMutation(s): 0 
UniProt
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Entity ID: 51
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S2YA [auth CC]221Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 52
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S3ZA [auth DD]227Oryctolagus cuniculusMutation(s): 0 
EC: 4.2.99.18
UniProt
Find proteins for G1TNM3 (Oryctolagus cuniculus)
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Entity ID: 53
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S4AB [auth EE]262Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1TA47 (Oryctolagus cuniculus)
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Entity ID: 54
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal protein S5BB [auth FF]191Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1TFM5 (Oryctolagus cuniculus)
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Entity ID: 55
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S6CB [auth GG]237Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 56
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S7DB [auth HH]189Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 57
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S8EB [auth II]206Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 58
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S9FB [auth JJ]185Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 59
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S10GB [auth KK]96Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 60
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S11HB [auth LL]151Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 61
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S13IB [auth NN]149Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 62
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S14JB [auth OO]136Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 63
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S15KB [auth PP]120Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 64
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S16LB [auth QQ]142Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 65
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S17MB [auth RR]132Oryctolagus cuniculusMutation(s): 0 
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Find proteins for G1TU13 (Oryctolagus cuniculus)
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Entity ID: 66
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S18NB [auth SS]144Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 67
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S19OB [auth TT]141Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 68
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S20PB [auth UU]100Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 69
MoleculeChains Sequence LengthOrganismDetailsImage
eS21QB [auth VV]83Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 70
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S15aRB [auth WW]129Oryctolagus cuniculusMutation(s): 0 
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Find proteins for G1TG89 (Oryctolagus cuniculus)
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Entity ID: 71
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S23SB [auth XX]141Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 72
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S24TB [auth YY]124Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 73
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S25UB [auth ZZ]75Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 74
MoleculeChains Sequence LengthOrganismDetailsImage
eS26VB [auth Aa]101Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 75
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S27WB [auth Bb]83Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 76
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S28XB [auth Cc]62Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 77
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S29YB [auth Dd]55Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 78
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S30ZB [auth Ee]55Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 79
MoleculeChains Sequence LengthOrganismDetailsImage
Receptor of activated protein C kinase 1AC [auth Gg]313Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 1
MoleculeChains LengthOrganismImage
P-site tRNAA [auth 2]76Oryctolagus cuniculus
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Entity ID: 2
MoleculeChains LengthOrganismImage
mRNAB [auth 1]6Oryctolagus cuniculus
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Entity ID: 3
MoleculeChains LengthOrganismImage
28s rRNAC [auth 5]3,499Oryctolagus cuniculus
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Entity ID: 4
MoleculeChains LengthOrganismImage
5S rRNAD [auth 7]120Oryctolagus cuniculus
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Entity ID: 5
MoleculeChains LengthOrganismImage
5.8S rRNAE [auth 8]156Oryctolagus cuniculus
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Entity ID: 6
MoleculeChains LengthOrganismImage
18S rRNAF [auth 9]1,698Oryctolagus cuniculus
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Small Molecules
Ligands 3 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
MQ6 (Subject of Investigation/LOI)
Query on MQ6

Download Ideal Coordinates CCD File 
OJ [auth 5]Harringtonine
C28 H37 N O9
HAVJATCHLFRDHY-ZBVBGGFBSA-N
ZN
Query on ZN

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KN [auth g]
LN [auth j]
MN [auth m]
NN [auth o]
ON [auth p]
KN [auth g],
LN [auth j],
MN [auth m],
NN [auth o],
ON [auth p],
RN [auth Aa],
SN [auth Dd]
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
MG
Query on MG

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AD [auth 5]
AE [auth 5]
AF [auth 5]
AG [auth 5]
AH [auth 5]
AD [auth 5],
AE [auth 5],
AF [auth 5],
AG [auth 5],
AH [auth 5],
AI [auth 5],
AJ [auth 5],
AK [auth 8],
AL [auth 9],
AM [auth 9],
AN [auth 9],
BC [auth 5],
BD [auth 5],
BE [auth 5],
BF [auth 5],
BG [auth 5],
BH [auth 5],
BI [auth 5],
BJ [auth 5],
BK [auth 8],
BL [auth 9],
BM [auth 9],
BN [auth 9],
CC [auth 5],
CD [auth 5],
CE [auth 5],
CF [auth 5],
CG [auth 5],
CH [auth 5],
CI [auth 5],
CJ [auth 5],
CK [auth 8],
CL [auth 9],
CM [auth 9],
CN [auth 9],
DC [auth 5],
DD [auth 5],
DE [auth 5],
DF [auth 5],
DG [auth 5],
DH [auth 5],
DI [auth 5],
DJ [auth 5],
DK [auth 8],
DL [auth 9],
DM [auth 9],
DN [auth A],
EC [auth 5],
ED [auth 5],
EE [auth 5],
EF [auth 5],
EG [auth 5],
EH [auth 5],
EI [auth 5],
EJ [auth 5],
EK [auth 9],
EL [auth 9],
EM [auth 9],
EN [auth I],
FC [auth 5],
FD [auth 5],
FE [auth 5],
FF [auth 5],
FG [auth 5],
FH [auth 5],
FI [auth 5],
FJ [auth 5],
FK [auth 9],
FL [auth 9],
FM [auth 9],
FN [auth N],
GC [auth 5],
GD [auth 5],
GE [auth 5],
GF [auth 5],
GG [auth 5],
GH [auth 5],
GI [auth 5],
GJ [auth 5],
GK [auth 9],
GL [auth 9],
GM [auth 9],
GN [auth P],
HC [auth 5],
HD [auth 5],
HE [auth 5],
HF [auth 5],
HG [auth 5],
HH [auth 5],
HI [auth 5],
HJ [auth 5],
HK [auth 9],
HL [auth 9],
HM [auth 9],
HN [auth V],
IC [auth 5],
ID [auth 5],
IE [auth 5],
IF [auth 5],
IG [auth 5],
IH [auth 5],
II [auth 5],
IJ [auth 5],
IK [auth 9],
IL [auth 9],
IM [auth 9],
IN [auth a],
JC [auth 5],
JD [auth 5],
JE [auth 5],
JF [auth 5],
JG [auth 5],
JH [auth 5],
JI [auth 5],
JJ [auth 5],
JK [auth 9],
JL [auth 9],
JM [auth 9],
JN [auth g],
KC [auth 5],
KD [auth 5],
KE [auth 5],
KF [auth 5],
KG [auth 5],
KH [auth 5],
KI [auth 5],
KJ [auth 5],
KK [auth 9],
KL [auth 9],
KM [auth 9],
LC [auth 5],
LD [auth 5],
LE [auth 5],
LF [auth 5],
LG [auth 5],
LH [auth 5],
LI [auth 5],
LJ [auth 5],
LK [auth 9],
LL [auth 9],
LM [auth 9],
MC [auth 5],
MD [auth 5],
ME [auth 5],
MF [auth 5],
MG [auth 5],
MH [auth 5],
MI [auth 5],
MJ [auth 5],
MK [auth 9],
ML [auth 9],
MM [auth 9],
NC [auth 5],
ND [auth 5],
NE [auth 5],
NF [auth 5],
NG [auth 5],
NH [auth 5],
NI [auth 5],
NJ [auth 5],
NK [auth 9],
NL [auth 9],
NM [auth 9],
OC [auth 5],
OD [auth 5],
OE [auth 5],
OF [auth 5],
OG [auth 5],
OH [auth 5],
OI [auth 5],
OK [auth 9],
OL [auth 9],
OM [auth 9],
PC [auth 5],
PD [auth 5],
PE [auth 5],
PF [auth 5],
PG [auth 5],
PH [auth 5],
PI [auth 5],
PJ [auth 5],
PK [auth 9],
PL [auth 9],
PM [auth 9],
PN [auth FF],
QC [auth 5],
QD [auth 5],
QE [auth 5],
QF [auth 5],
QG [auth 5],
QH [auth 5],
QI [auth 5],
QJ [auth 7],
QK [auth 9],
QL [auth 9],
QM [auth 9],
QN [auth TT],
RC [auth 5],
RD [auth 5],
RE [auth 5],
RF [auth 5],
RG [auth 5],
RH [auth 5],
RI [auth 5],
RJ [auth 7],
RK [auth 9],
RL [auth 9],
RM [auth 9],
SC [auth 5],
SD [auth 5],
SE [auth 5],
SF [auth 5],
SG [auth 5],
SH [auth 5],
SI [auth 5],
SJ [auth 7],
SK [auth 9],
SL [auth 9],
SM [auth 9],
TC [auth 5],
TD [auth 5],
TE [auth 5],
TF [auth 5],
TG [auth 5],
TH [auth 5],
TI [auth 5],
TJ [auth 7],
TK [auth 9],
TL [auth 9],
TM [auth 9],
UC [auth 5],
UD [auth 5],
UE [auth 5],
UF [auth 5],
UG [auth 5],
UH [auth 5],
UI [auth 5],
UJ [auth 7],
UK [auth 9],
UL [auth 9],
UM [auth 9],
VC [auth 5],
VD [auth 5],
VE [auth 5],
VF [auth 5],
VG [auth 5],
VH [auth 5],
VI [auth 5],
VJ [auth 7],
VK [auth 9],
VL [auth 9],
VM [auth 9],
WC [auth 5],
WD [auth 5],
WE [auth 5],
WF [auth 5],
WG [auth 5],
WH [auth 5],
WI [auth 5],
WJ [auth 7],
WK [auth 9],
WL [auth 9],
WM [auth 9],
XC [auth 5],
XD [auth 5],
XE [auth 5],
XF [auth 5],
XG [auth 5],
XH [auth 5],
XI [auth 5],
XJ [auth 8],
XK [auth 9],
XL [auth 9],
XM [auth 9],
YC [auth 5],
YD [auth 5],
YE [auth 5],
YF [auth 5],
YG [auth 5],
YH [auth 5],
YI [auth 5],
YJ [auth 8],
YK [auth 9],
YL [auth 9],
YM [auth 9],
ZC [auth 5],
ZD [auth 5],
ZE [auth 5],
ZF [auth 5],
ZG [auth 5],
ZH [auth 5],
ZI [auth 5],
ZJ [auth 8],
ZK [auth 9],
ZL [auth 9],
ZM [auth 9]
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Modified Residues  1 Unique
IDChains TypeFormula2D DiagramParent
MLZ
Query on MLZ
I [auth C]L-PEPTIDE LINKINGC7 H16 N2 O2LYS
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.10 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Cancer Institute (NIH/NCI)United States--

Revision History  (Full details and data files)

  • Version 1.0: 2022-06-01
    Type: Initial release
  • Version 2.0: 2022-07-06
    Type: Coordinate replacement
    Reason: Model orientation/position
    Changes: Advisory, Atomic model, Author supporting evidence, Data collection, Database references, Derived calculations, Structure summary
  • Version 2.1: 2022-08-17
    Changes: Database references