7TM9

Crystal structure of Bacterial alkaline phosphatase from Klebsiella pneumoniae

PDB DOI: https://doi.org/10.2210/pdb7TM9/pdb

Classification: HYDROLASE
Organism(s): Klebsiella pneumoniae subsp. pneumoniae HS11286
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No
Membrane Protein: Yes mpstruc

Deposited: 2022-01-19 Released: 2022-02-02
Deposition Author(s): Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Funding Organization(s): National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.95 Å
R-Value Free: 0.211
R-Value Work: 0.172
R-Value Observed: 0.174

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Crystal structure of Bacterial alkaline phosphatase from Klebsiella pneumoniae

Liu, L., Lovell, S., Battaile, K.P., Tillery, L., Shek, R., Craig, J.K., Barrett, L.K., Van Voorhis, W.C.

To be published.

Macromolecule Content

Total Structure Weight: 392.11 kDa
Atom Count: 29,621
Modelled Residue Count: 3,528
Deposited Residue Count: 3,712
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Bacterial alkaline phosphatase	A, B, C, D, E A, B, C, D, E, F, G, H	464	Klebsiella pneumoniae subsp. pneumoniae HS11286	Mutation(s): 0 Gene Names: KPHS_10650 Membrane Entity: Yes
UniProt
Find proteins for A0A0H3GK94 (Klebsiella pneumoniae subsp. pneumoniae (strain HS11286)) Explore A0A0H3GK94 Go to UniProtKB: A0A0H3GK94
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	A0A0H3GK94
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
ZN (Subject of Investigation/LOI) Query on ZN Download Ideal Coordinates CCD File SDF format, chain AA [auth G] SDF format, chain BA [auth G] SDF format, chain DA [auth H] SDF format, chain L [auth B] SDF format, chain O [auth C] SDF format, chain P [auth C] SDF format, chain S [auth D] SDF format, chain X [auth F] SDF format, chain Y [auth F] SDF format, chain EA [auth H] SDF format, chain I [auth A] SDF format, chain J [auth A] SDF format, chain M [auth B] SDF format, chain R [auth D] SDF format, chain U [auth E] SDF format, chain V [auth E] MOL2 format, chain AA [auth G] MOL2 format, chain BA [auth G] MOL2 format, chain DA [auth H] MOL2 format, chain L [auth B] MOL2 format, chain O [auth C] MOL2 format, chain P [auth C] MOL2 format, chain S [auth D] MOL2 format, chain X [auth F] MOL2 format, chain Y [auth F] MOL2 format, chain EA [auth H] MOL2 format, chain I [auth A] MOL2 format, chain J [auth A] MOL2 format, chain M [auth B] MOL2 format, chain R [auth D] MOL2 format, chain U [auth E] MOL2 format, chain V [auth E]	AA [auth G] BA [auth G] DA [auth H] EA [auth H] I [auth A] AA [auth G], BA [auth G], DA [auth H], EA [auth H], I [auth A], J [auth A], L [auth B], M [auth B], O [auth C], P [auth C], R [auth D], S [auth D], U [auth E], V [auth E], X [auth F], Y [auth F]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N		Interactions Focus chain AA [auth G] Focus chain BA [auth G] Focus chain DA [auth H] Focus chain EA [auth H] Focus chain I [auth A] Focus chain J [auth A] Focus chain L [auth B] Focus chain M [auth B] Focus chain O [auth C] Focus chain P [auth C] Focus chain R [auth D] Focus chain S [auth D] Focus chain U [auth E] Focus chain V [auth E] Focus chain X [auth F] Focus chain Y [auth F] Interactions & Density Focus chain AA [auth G] Focus chain BA [auth G] Focus chain DA [auth H] Focus chain EA [auth H] Focus chain I [auth A] Focus chain J [auth A] Focus chain L [auth B] Focus chain M [auth B] Focus chain O [auth C] Focus chain P [auth C] Focus chain R [auth D] Focus chain S [auth D] Focus chain U [auth E] Focus chain V [auth E] Focus chain X [auth F] Focus chain Y [auth F]
MG Query on MG Download Ideal Coordinates CCD File SDF format, chain CA [auth G] SDF format, chain FA [auth H] SDF format, chain K [auth A] SDF format, chain N [auth B] SDF format, chain W [auth E] SDF format, chain Z [auth F] SDF format, chain Q [auth C] SDF format, chain T [auth D] MOL2 format, chain CA [auth G] MOL2 format, chain FA [auth H] MOL2 format, chain K [auth A] MOL2 format, chain N [auth B] MOL2 format, chain W [auth E] MOL2 format, chain Z [auth F] MOL2 format, chain Q [auth C] MOL2 format, chain T [auth D]	CA [auth G] FA [auth H] K [auth A] N [auth B] Q [auth C] CA [auth G], FA [auth H], K [auth A], N [auth B], Q [auth C], T [auth D], W [auth E], Z [auth F]	MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N		Interactions Focus chain CA [auth G] Focus chain FA [auth H] Focus chain K [auth A] Focus chain N [auth B] Focus chain Q [auth C] Focus chain T [auth D] Focus chain W [auth E] Focus chain Z [auth F] Interactions & Density Focus chain CA [auth G] Focus chain FA [auth H] Focus chain K [auth A] Focus chain N [auth B] Focus chain Q [auth C] Focus chain T [auth D] Focus chain W [auth E] Focus chain Z [auth F]