7QWC | pdb_00007qwc

CC-Type1-(UbUc)4

PDB DOI: https://doi.org/10.2210/pdb7QWC/pdb

Classification: DE NOVO PROTEIN
Organism(s): synthetic construct
Mutation(s): No

Deposited: 2022-01-25 Released: 2023-02-01
Deposition Author(s): Martin, F.J.O., Zieleniewski, F., Dawson, W.M., Woolfson, D.N.
Funding Organization(s): European Research Council (ERC), Engineering and Physical Sciences Research Council, Biotechnology and Biological Sciences Research Council (BBSRC)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.69 Å
R-Value Free:
0.234 (Depositor), 0.220 (DCC)
R-Value Work:
0.199 (Depositor), 0.210 (DCC)
R-Value Observed:
0.201 (Depositor)

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

CC-Type1-(UbUc)4

Martin, F.J.O., Zieleniewski, F., Dawson, W.M., Woolfson, D.N.

To be published.

Macromolecule Content

Total Structure Weight: 10.16 kDa
Atom Count: 700
Modeled Residue Count: 87
Deposited Residue Count: 96
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
CC-Type1-(UbUc)4	A [auth B], B [auth C], C [auth E]	32	synthetic construct	Mutation(s): 0
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
Sequence Annotations Expand
Reference Sequence

Small Molecules

Modified Residues 2 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
4BF Query on 4BF	A [auth B], B [auth C], C [auth E]	L-PEPTIDE LINKING	C₉ H₁₀ Br N O₂		TYR
AIB Query on AIB	A [auth B], B [auth C], C [auth E]	L-PEPTIDE LINKING	C₄ H₉ N O₂		ALA

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.69 Å
R-Value Free: 0.234 (Depositor), 0.220 (DCC)
R-Value Work: 0.199 (Depositor), 0.210 (DCC)
R-Value Observed: 0.201 (Depositor)

Space Group: P 4₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 39.833	α = 90
b = 39.833	β = 90
c = 73.196	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
PDB_EXTRACT	data extraction
DIALS	data reduction
Aimless	data scaling
SHELXDE	phasing

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2023-02-01

Deposition Author(s):

Zieleniewski, F.

Funding Organization	Location	Grant Number
European Research Council (ERC)	United Kingdom	340764
Engineering and Physical Sciences Research Council	United Kingdom	EP/G036764
Biotechnology and Biological Sciences Research Council (BBSRC)	United Kingdom	BB R00661X 1

Revision History (Full details and data files)

Version 1.0: 2023-02-01
Type: Initial release

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.